{"id":"W2033837033","doi":"10.3791/935","title":"Methylated DNA Immunoprecipitation","year":2009,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Occupational Cancer Research Centre; University of British Columbia","funders":"Michael Smith Health Research BC","keywords":"Methylated DNA immunoprecipitation; Immunoprecipitation; DNA; Molecular biology; DNA methylation; Methylation; Chemistry; Biochemistry; Antibody; Biology; Monoclonal antibody; Gene; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002437732,0.006098759,0.006403102,0.00591254,0.002495854,0.002525817,0.005527747,0.002877636,0.03422716],"category_scores_gemma":[0.002488098,0.002306408,0.004628454,0.00623265,0.001144587,0.001526347,0.004276133,0.007871931,0.03482794],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001440017,"about_ca_system_score_gemma":0.001197156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001682965,"about_ca_topic_score_gemma":0.003928395,"domain_scores_codex":[0.9906723,0.001339139,0.0009693243,0.003146736,0.002196212,0.001676193],"domain_scores_gemma":[0.9984238,0.0003600454,0.0001239857,0.0002889856,0.0006263985,0.0001766971],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001545895,0.0009975698,0.001344529,0.003847427,0.0007121434,0.0008916292,0.0003598751,0.001196935,0.9031364,0.004698734,0.0346306,0.04663816],"study_design_scores_gemma":[0.0004399365,0.001240506,0.00620565,0.0004277311,0.0005983801,0.001592675,0.0001707469,0.009237458,0.5775373,0.004069986,0.3982008,0.000278835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.09574234,0.05529097,0.5572392,0.004774467,0.009818265,0.009972143,0.1274972,0.02115939,0.1185061],"genre_scores_gemma":[0.1176127,0.01931732,0.3495028,0.003451444,0.002508692,0.00881954,0.3518128,0.003268551,0.1437061],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.03422716,"threshold_uncertainty_score":0.1145012,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02125077034026259,"score_gpt":0.4191146629216562,"score_spread":0.3978638925813936,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}