{"id":"W2033947233","doi":"10.1007/s00285-012-0640-8","title":"Dynamic spatial pattern formation in the sea urchin embryo","year":2013,"lang":"en","type":"article","venue":"Journal of Mathematical Biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Mitacs; McGill University","keywords":"Sea urchin; Biology; Embryo; Transcription (linguistics); Gene; Cell biology; Evolutionary biology; Torus; Gene regulatory network; Gene expression; Biological system; Physics; Computational biology; Genetics; Mathematics; Geometry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006681011,0.00008776841,0.0001627065,0.0001888347,0.0002001085,0.0004480813,0.0002123218,0.000207642,0.0009207894],"category_scores_gemma":[0.0003506535,0.0002311998,0.0001206151,0.0001209402,0.0003173036,0.0002307429,0.0003570772,0.0001917653,0.0001862961],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004873763,"about_ca_system_score_gemma":0.0003340744,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004149348,"about_ca_topic_score_gemma":0.003277114,"domain_scores_codex":[0.999953,0.000007629832,0.000002336019,0.0000114151,0.00001557666,0.000009919539],"domain_scores_gemma":[0.9998738,0.00002516448,0.00002975417,0.00001590434,0.00002927559,0.00002607189],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0002812103,0.00003318253,0.01285139,0.00007598825,0.00003630889,0.001076246,0.0004571957,0.102874,0.7566372,0.09156386,0.001360196,0.03275322],"study_design_scores_gemma":[0.0001047008,0.0001683546,0.06958789,0.00003186175,0.00004245407,0.001210162,0.0005880984,0.7349223,0.1448398,0.04216031,0.006280874,0.0000632052],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9722291,0.0001185664,0.02364146,0.0001630896,0.000008430321,0.000004870179,0.00004789283,0.00006402355,0.003722585],"genre_scores_gemma":[0.9965562,0.00006026999,0.002082451,0.000008404108,0.000001678241,0.000004544936,0.00002582887,0.00001266295,0.001247961],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004149348,"threshold_uncertainty_score":0.008250415,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006484462419316694,"score_gpt":0.2498861366452488,"score_spread":0.2434016742259321,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}