{"id":"W2034345374","doi":"10.1016/j.molimm.2014.05.016","title":"Gene expression profile in long-term non progressor HIV infected patients: In search of potential resistance factors","year":2014,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Biology; Gene; Phenotype; Peripheral blood mononuclear cell; Viremia; Microarray; Allele; Virology; Downregulation and upregulation; Microarray analysis techniques; Immunology; Genetics; Gene expression; Human immunodeficiency virus (HIV); In vitro","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001940001,0.000211196,0.0004009538,0.000403642,0.0000582364,0.000007625758,0.000290104,0.0003379585,0.0002029621],"category_scores_gemma":[0.0001280794,0.0001813762,0.0000791148,0.0002769687,0.0002872886,0.00006473587,0.0002038244,0.0004182786,0.0001842189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009950372,"about_ca_system_score_gemma":0.00007233228,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000119891,"about_ca_topic_score_gemma":0.0001268031,"domain_scores_codex":[0.9976972,0.0007660057,0.0004143382,0.0004057616,0.00008262767,0.00063408],"domain_scores_gemma":[0.9992552,0.00006363582,0.0001098396,0.0004315221,0.000114416,0.00002541249],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005220889,0.0007127383,0.3654487,0.00003196598,0.00006564721,0.00004708361,0.0001939826,0.000006358689,0.6315238,0.00001549752,0.00003203051,0.001400202],"study_design_scores_gemma":[0.00295796,0.0002985942,0.4972362,0.00006194595,0.00000502066,0.000002099371,0.00001219873,0.000001336221,0.49928,0.000008470055,0.00004899759,0.00008712603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970342,0.001386856,0.0003683009,0.0000496042,0.0001237039,0.0007547173,0.00005371506,0.0000237091,0.000205178],"genre_scores_gemma":[0.9980587,0.00006100578,0.0001528705,0.00000764142,0.000003676951,0.0001087185,0.001296278,0.0000225393,0.000288589],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1322437,"threshold_uncertainty_score":0.7396306,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005373896109533897,"score_gpt":0.2416728619330472,"score_spread":0.2362989658235133,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}