{"id":"W2034455770","doi":"10.1016/j.fgb.2013.01.009","title":"The 135 kbp mitochondrial genome of Agaricus bisporus is the largest known eukaryotic reservoir of group I introns and plasmid-related sequences","year":2013,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Group II intron; Mitochondrial DNA; Group I catalytic intron; Genetics; Intron; Genome; Plasmid; Gene; Agaricus bisporus; Mobile genetic elements; Ribozyme; RNA; RNA splicing; Botany; Mushroom","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006388967,0.0003722459,0.0003110135,0.0006139293,0.0003245797,0.0003591539,0.0002064928,0.0001844272,0.001276176],"category_scores_gemma":[0.0003056894,0.0001238373,0.0001918166,0.0008652795,0.0002085432,0.0002897089,0.0002841845,0.0003183232,0.0007402999],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000204321,"about_ca_system_score_gemma":0.0005488785,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003054376,"about_ca_topic_score_gemma":0.002432975,"domain_scores_codex":[0.9999509,0.000004545971,0.000003511213,0.00001789823,0.00001682496,0.000006357876],"domain_scores_gemma":[0.9997337,0.00006437502,0.00008159447,0.00001962131,0.00002558567,0.00007503184],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006978803,0.00006222287,0.005100188,0.0003305314,0.00002111947,0.0002803526,0.000283208,0.0002280318,0.9617098,0.0006469899,0.0002881355,0.0303517],"study_design_scores_gemma":[0.00008706567,0.0009380252,0.5025221,0.0001970583,0.000293195,0.002742784,0.001373527,0.002301543,0.4346359,0.002901781,0.0519183,0.00008870789],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9732785,0.001006433,0.007101525,0.0001468509,0.00003919386,0.00004000693,0.01452779,0.0003767926,0.003483058],"genre_scores_gemma":[0.9619298,0.001003224,0.009009968,0.00006889066,0.00002456442,0.00004799062,0.02627435,0.000091399,0.001549785],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003054376,"threshold_uncertainty_score":0.006073177,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01112591825501281,"score_gpt":0.2254744105470558,"score_spread":0.214348492292043,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}