{"id":"W2035139729","doi":"10.1038/ismej.2010.193","title":"Coral-mucus-associated <i>Vibrio</i> integrons in the Great Barrier Reef: genomic hotspots for environmental adaptation","year":2011,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Coral and Marine Ecosystems Studies","field":"Environmental Science","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Dalhousie University","funders":"","keywords":"Biology; Integron; Vibrio; Pocillopora damicornis; rpoB; Vibrio alginolyticus; Microbiology; Vibrio parahaemolyticus; Genetics; Coral; Gene; Antibiotic resistance; Ecology; Bacteria; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008664571,0.0001455472,0.0001531368,0.00002627164,0.000472964,0.00003788934,0.0004203486,0.00004363328,0.0008639356],"category_scores_gemma":[0.00003757106,0.0000778844,0.0001092262,0.00009063928,0.0001267283,0.0001871007,0.0001745617,0.0002749129,0.0001462996],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002729403,"about_ca_system_score_gemma":0.00001078169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004560758,"about_ca_topic_score_gemma":0.001767884,"domain_scores_codex":[0.9988667,0.000165721,0.0002857388,0.0001470489,0.0002330322,0.0003017309],"domain_scores_gemma":[0.9994907,0.00009846075,0.000181503,0.000170378,0.000004439116,0.00005446104],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007277377,0.0008369091,0.697483,0.00001619808,0.0003181901,0.00007866327,0.08713505,0.0003794842,0.02900481,0.0003725072,0.06823993,0.1154075],"study_design_scores_gemma":[0.0007026389,0.0002336923,0.9811596,0.00001669174,0.00005518484,0.000125013,0.004391391,0.001091528,0.00009503232,0.002756796,0.009199357,0.0001731352],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927654,0.0000931977,0.0002032409,0.0008009901,0.000265931,0.0003751176,0.00001997441,0.00001078258,0.005465355],"genre_scores_gemma":[0.9970517,0.0001069518,0.000148047,0.0004062414,0.00009540045,0.00003558507,0.000003472151,0.00001333484,0.002139295],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2836765,"threshold_uncertainty_score":0.9459489,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0347788599059846,"score_gpt":0.2036890217997312,"score_spread":0.1689101618937466,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}