{"id":"W2035368412","doi":"10.1021/ac5011684","title":"Development of a Universal Metabolome-Standard Method for Long-Term LC–MS Metabolome Profiling and Its Application for Bladder Cancer Urine-Metabolite-Biomarker Discovery","year":2014,"lang":"en","type":"article","venue":"Analytical Chemistry","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Metabolome; Metabolomics; Chemistry; Reproducibility; Biomarker discovery; Urine; Chromatography; Metabolite; Mass spectrometry; Sample preparation; Proteomics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009207112,0.001839607,0.001187947,0.003200102,0.001393528,0.001058828,0.001633184,0.002216433,0.001342101],"category_scores_gemma":[0.008379906,0.001016336,0.001202123,0.002539129,0.001553086,0.001284489,0.002343214,0.001791598,0.001293938],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000951556,"about_ca_system_score_gemma":0.002651497,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001371569,"about_ca_topic_score_gemma":0.004146948,"domain_scores_codex":[0.9882576,0.003563442,0.0009450864,0.003007136,0.003813154,0.000413638],"domain_scores_gemma":[0.9956335,0.0006992191,0.0007196006,0.001012504,0.001758958,0.0001761805],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001682125,0.0001037799,0.003597851,0.000295937,0.0001077914,0.00007577104,0.0001390929,0.000631834,0.9462453,0.001220401,0.0006334039,0.04678068],"study_design_scores_gemma":[0.0000223507,0.0004013602,0.005111512,0.00005442963,0.0000835421,0.0004238659,0.00005258082,0.008857961,0.9741092,0.0006904671,0.01011082,0.00008195658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.05438926,0.002161681,0.9380224,0.0002051539,0.0002491902,0.0008626867,0.0007803084,0.002043232,0.001286058],"genre_scores_gemma":[0.08138333,0.001064949,0.9120415,0.0003013017,0.00005395025,0.001740774,0.001543502,0.0002258881,0.001644778],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.009207112,"threshold_uncertainty_score":0.04869246,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01627139580820798,"score_gpt":0.3112906757652878,"score_spread":0.2950192799570798,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}