{"id":"W2036258026","doi":"10.1021/pr300139q","title":"Quantitative Metabolomic Profiling of Serum, Plasma, and Urine by <sup>1</sup> H NMR Spectroscopy Discriminates between Patients with Inflammatory Bowel Disease and Healthy Individuals","year":2012,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":246,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Oesterreichische Nationalbank; Fondation pour la Recherche Médicale; Genome Alberta; Austrian Science Fund; Deutsche Forschungsgemeinschaft; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation; University of Calgary","keywords":"Urine; Metabolomics; Ulcerative colitis; Chemistry; Allantoin; Metabolome; Inflammatory bowel disease; Internal medicine; Blood proteins; Betaine; Crohn's disease; Chromatography; Medicine; Biochemistry; Disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001835789,0.0001818775,0.0003986347,0.0002723147,0.0001570107,0.00003461596,0.0001672589,0.00007655322,0.000006653993],"category_scores_gemma":[0.0004431902,0.0001284469,0.00005225109,0.0001539525,0.0003418907,0.00004199909,0.0002516175,0.000364763,6.23438e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002530355,"about_ca_system_score_gemma":0.0001437194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005899088,"about_ca_topic_score_gemma":9.762034e-7,"domain_scores_codex":[0.9979936,0.0002963916,0.0004478746,0.0002242733,0.0005466217,0.0004912229],"domain_scores_gemma":[0.9986292,0.00009794159,0.0003370821,0.000164144,0.000410282,0.0003613757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001099704,0.0001864051,0.8939334,0.0003192523,0.0004094146,0.000001309968,0.0002559279,0.000004395439,0.1031882,0.0002641661,0.0001633887,0.0001744169],"study_design_scores_gemma":[0.002538948,0.003906577,0.7666191,0.00009541879,0.0001441073,0.000004807712,0.0007524883,0.0000207595,0.2247617,0.0003331898,0.0005854922,0.0002374168],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892828,0.009504396,0.0001129511,0.0002620349,0.00001522153,0.0005965909,0.0002012181,0.000001886077,0.00002284451],"genre_scores_gemma":[0.9918876,0.002209246,0.005645954,0.000009813092,0.0001461806,0.00002224859,0.00002102744,0.00002416283,0.00003380185],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1273143,"threshold_uncertainty_score":0.5237911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02571193499632185,"score_gpt":0.3257974212748372,"score_spread":0.3000854862785153,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}