{"id":"W2036268678","doi":"10.1016/j.micinf.2006.04.015","title":"The temperature-sensing protein TlpA is repressed by PhoP and dispensable for virulence of Salmonella enterica serovar Typhimurium in mice","year":2006,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Virulence; Biology; Salmonella enterica; rpoS; Salmonella; Microbiology; Pathogenicity island; Plasmid; Enterobacteriaceae; Serotype; Bacteria; Genetics; Escherichia coli; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002075184,0.00008789335,0.0001374001,0.000007033592,0.0001507021,0.00003917282,0.00003654302,0.0000803205,0.000008246989],"category_scores_gemma":[0.00002495782,0.00003474976,0.00003192011,0.00009949577,0.00007360543,0.0000574432,0.00002734789,0.00005839402,6.579007e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008593868,"about_ca_system_score_gemma":0.000001767634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003593493,"about_ca_topic_score_gemma":0.0006687377,"domain_scores_codex":[0.9993505,0.00006058304,0.0001902819,0.0002124729,0.00002909913,0.000157007],"domain_scores_gemma":[0.9996958,0.000131499,0.00008649127,0.00003385574,0.00003443441,0.00001787743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004712369,0.00002376751,0.01516837,0.000012408,0.000003101537,1.352707e-7,0.00001849298,8.446619e-7,0.976614,0.00001728735,0.001467338,0.00662713],"study_design_scores_gemma":[0.0002934047,0.0002763284,0.2028258,0.00006281096,0.00001097718,0.00001705554,0.00006694186,0.0002318495,0.7582045,0.0009981237,0.03684263,0.0001696314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980782,0.0009171912,0.00001066932,0.0005812731,0.00004843792,0.0002603176,0.00002062447,0.00001038594,0.00007293621],"genre_scores_gemma":[0.9990669,0.000442027,0.0000550207,0.0001117044,0.00006048152,0.000008302632,0.00001937208,9.904128e-7,0.0002352369],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2184095,"threshold_uncertainty_score":0.5432311,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006693744415088426,"score_gpt":0.2015057448977659,"score_spread":0.1948120004826774,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}