{"id":"W2036312369","doi":"10.1074/jbc.m710247200","title":"The Structure of Clostridium perfringens NanI Sialidase and Its Catalytic Intermediates","year":2008,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; European Synchrotron Radiation Facility; Royal Society; Directorate for Biological Sciences; Royal Society of Edinburgh; European Commission","keywords":"Sialidase; Clostridium perfringens; Sialic acid; Chemistry; Glycoconjugate; Neuraminic acid; N-Acetylneuraminic acid; Biochemistry; Glycan; Covalent bond; Stereochemistry; Bacteria; Enzyme; Biology; Neuraminidase; Glycoprotein; Organic chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002870516,0.00007374297,0.0001968979,0.00001489458,0.00008858521,0.000007755943,0.0001339395,0.00009065003,0.00009397868],"category_scores_gemma":[0.001077254,0.00003576828,0.00008184005,0.00007649506,0.0002862407,0.00002518879,0.00005669233,0.0003127407,0.000001194701],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000281055,"about_ca_system_score_gemma":0.0001033829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":8.055586e-7,"about_ca_topic_score_gemma":1.749743e-7,"domain_scores_codex":[0.9993145,0.0000137912,0.0002869105,0.00007808974,0.0001601313,0.0001465153],"domain_scores_gemma":[0.999162,0.0001719414,0.0001652073,0.0001097468,0.000217021,0.0001740908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000137862,0.00003883497,0.003592613,0.00003241721,0.00003715558,0.00003729242,0.00003551953,1.258826e-7,0.9951732,0.0000103293,0.0005506811,0.0003539241],"study_design_scores_gemma":[0.0004232806,0.000260549,0.07280724,0.00002863074,0.00001465472,0.002222991,0.0001216863,0.000005719255,0.9217802,0.00006303457,0.002233447,0.00003859046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99634,0.002205929,0.000001594358,0.001066937,0.00002622073,0.00005229372,0.00002853025,0.000003753858,0.0002747633],"genre_scores_gemma":[0.9975439,0.001950196,0.00004424818,0.00002935853,0.0002598613,4.257099e-7,0.000005779033,0.00000340014,0.0001628813],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07339307,"threshold_uncertainty_score":0.1458588,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03383101902964265,"score_gpt":0.2900502218042094,"score_spread":0.2562192027745667,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}