{"id":"W2036754283","doi":"10.1016/j.febslet.2014.05.022","title":"Tracking bacterial pathogens with genetically‐encoded reporters","year":2014,"lang":"en","type":"review","venue":"FEBS Letters","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Adaptation (eye); Bacteria; Host adaptation; Computational biology; Host (biology); Microbiology; Gene; Cell biology; Virulence; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003437753,0.0006461521,0.001330775,0.0001152983,0.000133596,0.0001373862,0.000493115,0.0003481241,0.00004193659],"category_scores_gemma":[0.0001832689,0.0004862905,0.0004855428,0.0001384676,0.0002656759,0.00000440846,0.000300541,0.0003111204,0.00004477354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000624452,"about_ca_system_score_gemma":0.0002209817,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007158725,"about_ca_topic_score_gemma":0.00001939318,"domain_scores_codex":[0.9969508,0.0003220048,0.0006478181,0.001011398,0.0003531242,0.0007148764],"domain_scores_gemma":[0.9982951,0.00004099369,0.0004085404,0.0009795007,0.00008759948,0.0001882744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002030893,0.00009538113,0.0000733541,0.009694328,0.002323492,0.0005379652,0.00005872779,0.000005850528,0.1938578,0.000007080674,0.01738035,0.7757626],"study_design_scores_gemma":[0.0003134696,0.0002486841,0.00004589256,0.001424304,0.0003722768,0.0001946496,0.000004117746,6.343837e-7,0.0006309898,5.191644e-7,0.9961377,0.000626748],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.009864333,0.9853704,0.001858854,0.0003636657,0.0006879609,0.00128935,0.0001520265,0.00006137007,0.0003520476],"genre_scores_gemma":[0.000326742,0.9943823,0.001522032,0.0005096005,0.00156222,0.0002253814,0.001143713,0.0001651586,0.0001628667],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9787574,"threshold_uncertainty_score":0.9997589,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02813083696629628,"score_gpt":0.3047787265728856,"score_spread":0.2766478896065893,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}