{"id":"W2037372250","doi":"10.1021/pr401191w","title":"Annotating N Termini for the Human Proteome Project: N Termini and Nα-Acetylation Status Differentiate Stable Cleaved Protein Species from Degradation Remnants in the Human Erythrocyte Proteome","year":2014,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Biology; Human proteome project; Proteomics; Peptide mass fingerprinting; Biochemistry; Computational biology; Protein domain; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008902433,0.0006435976,0.0005163368,0.001256822,0.0006934227,0.0005395609,0.0003569887,0.0003798896,0.003071489],"category_scores_gemma":[0.001089177,0.0002196985,0.0005530848,0.001396799,0.0001615483,0.0004270874,0.0006598862,0.000630272,0.001694998],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000239405,"about_ca_system_score_gemma":0.0008485059,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009581443,"about_ca_topic_score_gemma":0.001282686,"domain_scores_codex":[0.9996743,0.00005275635,0.00005007357,0.0001063751,0.00008111636,0.00003531906],"domain_scores_gemma":[0.99961,0.00006866262,0.00007383901,0.00006745507,0.0001034864,0.00007655084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001325637,0.0001155168,0.02030024,0.0009368118,0.0001081441,0.000619918,0.000362548,0.0004438876,0.9351379,0.0005602381,0.005206293,0.03488279],"study_design_scores_gemma":[0.0002139769,0.0007983884,0.3445626,0.0002220253,0.0004179293,0.004997517,0.0004342235,0.02265754,0.5334904,0.001302369,0.09079396,0.0001089354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8231547,0.002847726,0.0793602,0.0003219167,0.0001054177,0.0004701279,0.08784604,0.002086747,0.003807158],"genre_scores_gemma":[0.3503307,0.00199731,0.3751268,0.0001443165,0.00004853927,0.0007530686,0.2645883,0.0009626577,0.006048292],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003071489,"threshold_uncertainty_score":0.01027513,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1060391309076949,"score_gpt":0.3990807923249187,"score_spread":0.2930416614172238,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}