{"id":"W2037409969","doi":"10.1126/science.1198545","title":"Rapid Pneumococcal Evolution in Response to Clinical Interventions","year":2011,"lang":"en","type":"article","venue":"Science","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":912,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Biology; Lineage (genetic); Streptococcus pneumoniae; Genetics; Serotype; Population; Microbiology; Insertion sequence; Drug resistance; Virology; Gene; Antibiotics; Transposable element; Genome; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009597176,0.0001799007,0.0003721643,0.000532712,0.000234187,0.0006643508,0.0002179838,0.0008175755,0.002052089],"category_scores_gemma":[0.006620829,0.0001566356,0.0001963818,0.0003571987,0.0003390232,0.000553656,0.0006242772,0.0006334143,0.0003893957],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003857435,"about_ca_system_score_gemma":0.0002354755,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002741045,"about_ca_topic_score_gemma":0.0002937748,"domain_scores_codex":[0.9988758,0.0004087521,0.00006425712,0.000208344,0.0001972172,0.0002455787],"domain_scores_gemma":[0.9983258,0.0004907484,0.0005758554,0.0001887938,0.0001894402,0.0002293222],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003072412,0.0005308216,0.7681815,0.0001932656,0.0002835918,0.002855685,0.001410421,0.003106683,0.08663534,0.001819145,0.001198744,0.1307125],"study_design_scores_gemma":[0.00001653001,0.0009548176,0.9902147,0.00001562861,0.00002719859,0.001674736,0.0006700488,0.001019397,0.002677521,0.0007777826,0.001936472,0.00001517693],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966279,0.0008188136,0.0005749133,0.0003003038,0.00001777451,0.00001739361,0.00007879058,0.00001686658,0.001547253],"genre_scores_gemma":[0.999325,0.0001515328,0.0001233736,0.00008696911,0.0000225166,0.000007789644,0.00006711543,0.000002781552,0.0002128648],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002052089,"threshold_uncertainty_score":0.006864965,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1372938170234429,"score_gpt":0.4150225164928371,"score_spread":0.2777286994693942,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}