{"id":"W2037590353","doi":"10.1021/es201045e","title":"Pathogenic Bacteria in Sewage Treatment Plants as Revealed by 454 Pyrosequencing","year":2011,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":210,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Hong Kong","keywords":"Pyrosequencing; Pathogenic bacteria; Biology; Bacteria; 16S ribosomal RNA; Microbiology; Effluent; Aeromonas; Clostridium perfringens; Clostridium; Sewage treatment; Bacteroidetes; Sewage; Microorganism; Aeromonas hydrophila; Gene; Genetics; Environmental science; Environmental engineering","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003784639,0.0002625619,0.000277712,0.0002326762,0.0004247658,0.00001018367,0.001040068,0.0002716485,0.01388348],"category_scores_gemma":[0.00002235123,0.00024548,0.00004761976,0.000584311,0.003202351,0.0003067393,0.0007801718,0.0003127331,0.002298502],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001185106,"about_ca_system_score_gemma":0.00002940115,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001206172,"about_ca_topic_score_gemma":0.001198747,"domain_scores_codex":[0.9979567,0.000112309,0.0003060584,0.0006753101,0.0001563489,0.000793302],"domain_scores_gemma":[0.9990804,0.00002743025,0.0001218558,0.0006414548,9.559635e-7,0.000127934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002859356,0.0003008867,0.1275511,6.079125e-7,0.000003825675,0.00003914848,0.000804745,0.000005976845,0.8679543,0.00005110024,0.0001276511,0.00313201],"study_design_scores_gemma":[0.001425016,0.00195491,0.4884477,0.00001727972,0.00001812949,0.0003239187,0.001559792,0.00004125756,0.4821188,0.006423397,0.01682665,0.0008430848],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931832,0.00005428423,0.000005974057,0.000117985,0.0001186906,0.0003295667,0.00002677532,0.00007924851,0.006084301],"genre_scores_gemma":[0.9984504,0.0001748867,0.0005341115,0.0002398868,0.00000640898,0.00005393885,0.0000286624,0.00001472313,0.0004969842],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3858355,"threshold_uncertainty_score":0.9999998,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01067770211689245,"score_gpt":0.2053294562238401,"score_spread":0.1946517541069476,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}