{"id":"W2037635815","doi":"10.1128/jb.00823-08","title":"<i>Escherichia coli</i>Harboring a Natural IncF Conjugative F Plasmid Develops Complex Mature Biofilms by Stimulating Synthesis of Colanic Acid and Curli","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institut National des Sciences Appliquées de Lyon; Vlaamse regering; Karl-Franzens-Universität Graz; Vlaams Instituut voor Biotechnologie; Institute of Genetics; Indian National Science Academy","keywords":"Biofilm; Pilus; Plasmid; Biology; rpoS; Escherichia coli; Fimbria; Microbiology; Gene; Cell biology; Bacteria; Genetics; Promoter; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002191996,0.0002247393,0.0005617506,0.00006739047,0.0001208288,0.00001582495,0.0001593629,0.0002674359,0.00002268994],"category_scores_gemma":[0.0002504919,0.0001906097,0.0001074411,0.00009582272,0.0002892214,0.00001710967,0.0001183244,0.000277161,9.76808e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002075923,"about_ca_system_score_gemma":0.0001320381,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001376253,"about_ca_topic_score_gemma":0.000004566682,"domain_scores_codex":[0.9986224,0.0001647593,0.0006096055,0.0002268657,0.0001029698,0.0002734266],"domain_scores_gemma":[0.9987445,0.00008928181,0.0006901557,0.0001351986,0.0002346128,0.0001062842],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005574309,0.00003434808,0.005133166,0.00002753292,0.0001651863,0.00001763511,0.0001124396,0.000003964532,0.9930325,0.00001133494,0.0005193939,0.0003850554],"study_design_scores_gemma":[0.0008831767,0.0006455953,0.05552773,0.00008182434,0.00004637339,0.0006158711,0.0001064365,0.00005820753,0.9374717,0.000003866966,0.004311307,0.000247945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984586,0.0007758081,0.00003794135,0.00016986,0.0003302502,0.00009365618,0.00006102065,0.000005042958,0.00006781871],"genre_scores_gemma":[0.9935181,0.0003940467,0.005570468,0.0002379863,0.0002033042,0.000001518134,0.00003522647,0.00002290923,0.00001640394],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05556085,"threshold_uncertainty_score":0.777284,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.012417158625654,"score_gpt":0.2308935747302661,"score_spread":0.2184764161046121,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}