{"id":"W2037955711","doi":"10.1039/b718621e","title":"Computational comparison of the stacking interactions between the aromatic amino acids and the natural or (cationic) methylated nucleobases","year":2008,"lang":"en","type":"article","venue":"Physical Chemistry Chemical Physics","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Lethbridge","funders":"University of Lethbridge","keywords":"Nucleobase; Stacking; Chemistry; Crystallography; Stereochemistry; Computational chemistry; DNA; Organic chemistry; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004763403,0.001169899,0.001679612,0.0007429435,0.001008238,0.0009397854,0.00116833,0.00185417,0.005744533],"category_scores_gemma":[0.001400844,0.0005446606,0.0008107639,0.001154699,0.0006770342,0.0007559187,0.0008081713,0.001072088,0.0004671327],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001139164,"about_ca_system_score_gemma":0.001655275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009437537,"about_ca_topic_score_gemma":0.009863435,"domain_scores_codex":[0.9998221,0.00005205571,0.00000581854,0.00002395861,0.00004000449,0.0000560235],"domain_scores_gemma":[0.9992563,0.0005239114,0.00003799544,0.0000323983,0.00008005439,0.00006929478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003084087,0.00009572049,0.001300606,0.0003169312,0.0001095509,0.0003130181,0.00005068684,0.9841123,0.001881327,0.006134039,0.001304017,0.004073374],"study_design_scores_gemma":[0.000107248,0.0001687326,0.0007190243,0.00002569684,0.00005304256,0.00003769806,0.00008245368,0.9940011,0.001130722,0.002757989,0.0009000614,0.00001628385],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9588616,0.001868845,0.01081986,0.0005398287,0.000125631,0.00007976412,0.001931437,0.0003052104,0.02546782],"genre_scores_gemma":[0.9847025,0.0006773,0.009402385,0.0002005276,0.00003991163,0.0002587582,0.001383761,0.0001101324,0.003224719],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009437537,"threshold_uncertainty_score":0.01921743,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0197570339895585,"score_gpt":0.2871675310562301,"score_spread":0.2674104970666716,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}