{"id":"W2038275670","doi":"10.1089/omi.2009.0118","title":"Analysis of Genome-Wide Coexpression and Coevolution of <i>Aspergillus oryzae</i> and <i>Aspergillus niger</i>","year":2010,"lang":"en","type":"article","venue":"OMICS A Journal of Integrative Biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fondation Chalmers; Consejo Nacional de Ciencia y Tecnología","keywords":"Biology; Gene; Genome; Peroxisome; Aspergillus niger; Aspergillus oryzae; Genetics; Biogenesis; Aspergillus; Transcription factor; Computational biology; Biochemistry; Enzyme","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002123266,0.0001749117,0.0002345179,0.0005402008,0.0001512368,0.0002927735,0.0001313878,0.000151652,0.0006935377],"category_scores_gemma":[0.0002896443,0.0001148903,0.0002933298,0.000533495,0.0001212205,0.0001431311,0.000278559,0.0002748152,0.0001548853],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001981285,"about_ca_system_score_gemma":0.0001047899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001014329,"about_ca_topic_score_gemma":0.001500744,"domain_scores_codex":[0.9998172,0.00002204263,0.00001335915,0.0000876077,0.00003110117,0.00002869278],"domain_scores_gemma":[0.9996555,0.00008292666,0.0001302905,0.00003901959,0.00003458679,0.00005773677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001610484,0.00001775897,0.03304376,0.00003737931,0.00008217078,0.0000730486,0.00006290724,0.0001261274,0.9633134,0.0000706004,0.00003675788,0.002975176],"study_design_scores_gemma":[0.000009103263,0.0001766774,0.9190061,0.000007476493,0.0001136333,0.0007242355,0.000160353,0.001435639,0.07698505,0.00009414063,0.001276968,0.00001056281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982086,0.0001646645,0.0007197413,0.00001344569,0.000002039303,0.000005509889,0.0005932984,0.00001616399,0.0002766003],"genre_scores_gemma":[0.9963573,0.0001181107,0.001120894,0.00002385931,0.000002585194,0.00001008469,0.002055071,0.00001495235,0.0002972026],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001014329,"threshold_uncertainty_score":0.002320111,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006771982927544528,"score_gpt":0.2655344575739594,"score_spread":0.2587624746464148,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}