{"id":"W2038540528","doi":"10.1126/science.1058758","title":"Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria","year":2001,"lang":"en","type":"article","venue":"Science","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":379,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Flagellum; Plasmid; Mutant; Gene; Transcription (linguistics); Biology; Reporter gene; Escherichia coli; Gene expression; Computational biology; Genetics; Phenotype; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000359714,0.0003900967,0.0003735509,0.0004538156,0.0001829783,0.0006341306,0.0003313115,0.0002860427,0.0002937781],"category_scores_gemma":[0.0009869565,0.0003004536,0.0002735662,0.0004910892,0.0002566881,0.0004333637,0.0001979166,0.0006503728,0.0002339843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005698728,"about_ca_system_score_gemma":0.0004825621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001319831,"about_ca_topic_score_gemma":0.001198245,"domain_scores_codex":[0.9998218,0.00002312766,0.00001386708,0.00004566525,0.00007414896,0.00002144016],"domain_scores_gemma":[0.9995738,0.0001742052,0.00007584858,0.00005128316,0.00008387972,0.0000409934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007162512,0.00001465959,0.0009461142,0.00003357204,0.00000491506,0.00001642758,0.00002854583,0.002231857,0.9926353,0.0003931997,0.00001570496,0.003608166],"study_design_scores_gemma":[0.00001124813,0.00009544304,0.004130936,0.000006045437,0.00001430096,0.00007923311,0.00003833912,0.04700695,0.9467828,0.0008339445,0.0009750622,0.0000256629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.847398,0.0005558773,0.1505912,0.00007886859,0.00001407159,0.00004163945,0.0003456102,0.0005392829,0.0004354742],"genre_scores_gemma":[0.8670235,0.001166755,0.1294462,0.00003095219,0.00000842497,0.00008105937,0.0009742224,0.0002043369,0.001064621],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001319831,"threshold_uncertainty_score":0.004134774,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007010203622438409,"score_gpt":0.2272658447672024,"score_spread":0.220255641144764,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}