{"id":"W2038624062","doi":"10.1371/journal.pone.0005761","title":"A Novel Protein Isoform of the Multicopy Human NAIP Gene Derives from Intragenic Alu SINE Promoters","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Biology; Promoter; Retrotransposon; Genetics; Alu element; Gene; Genome; Human genome; Gene expression; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000680554,0.0002489665,0.0001367595,0.0002085191,0.0001612806,0.0002393192,0.0002577387,0.0001999233,0.001016401],"category_scores_gemma":[0.0001167454,0.0001568426,0.0002487281,0.0001884875,0.0002288027,0.0001620685,0.0002901905,0.0005406644,0.0009473257],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002531062,"about_ca_system_score_gemma":0.0002053751,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001972379,"about_ca_topic_score_gemma":0.0003693015,"domain_scores_codex":[0.999929,0.000005298559,0.000005808261,0.00003442668,0.00001435456,0.00001116044],"domain_scores_gemma":[0.9999033,0.00002246509,0.00002086625,0.00002036949,0.00001141635,0.00002147987],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002564142,0.000008462306,0.0002766431,0.00001365503,0.000002235633,0.00009049707,0.00001696083,0.00001711039,0.9977985,0.0001331289,0.00001927069,0.001597832],"study_design_scores_gemma":[0.00001941378,0.0001953477,0.01212273,0.00001206149,0.0000291474,0.00290024,0.00005966136,0.00150698,0.9736049,0.0002588353,0.009280297,0.00001042578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9790212,0.0009193679,0.01643827,0.00009889719,0.00004377493,0.00005315286,0.000779015,0.0002006772,0.002445586],"genre_scores_gemma":[0.9783819,0.0004807577,0.0132359,0.000051058,0.000020731,0.00005511039,0.002781369,0.00007964813,0.004913601],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001016401,"threshold_uncertainty_score":0.003400207,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02278681436305136,"score_gpt":0.2273527915904063,"score_spread":0.204565977227355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}