{"id":"W2038843244","doi":"10.1152/physiolgenomics.00149.2004","title":"Identification of MEF2-regulated genes during muscle differentiation","year":2004,"lang":"en","type":"article","venue":"Physiological Genomics","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network","funders":"","keywords":"Biology; Transcription factor; Gene; Genetics; Chromatin immunoprecipitation; Mef2; TBX1; DNA binding site; Promoter; Computational biology; Enhancer; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005143454,0.0001142812,0.0001396081,0.00002347839,0.00007871982,0.000005682308,0.0001591672,0.000141746,0.00001791924],"category_scores_gemma":[0.00003281924,0.0001007209,0.00009513467,0.00006111636,0.0001331802,0.000004069243,0.00008912702,0.00005053562,0.00001107561],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000140421,"about_ca_system_score_gemma":0.00002201004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007996886,"about_ca_topic_score_gemma":0.000003499418,"domain_scores_codex":[0.9992162,0.00003787166,0.0002500498,0.0002854803,0.00005269957,0.0001577],"domain_scores_gemma":[0.9995078,0.000003990551,0.0001410165,0.0002590023,0.00005074153,0.0000374818],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001001143,0.0001198949,0.0001400139,0.00001846743,0.00002732522,1.543215e-7,0.0000256747,0.007428938,0.9913185,0.0003800575,0.000007614033,0.0004332857],"study_design_scores_gemma":[0.0004606624,0.0001059163,0.2903059,0.000002419411,0.000009268279,5.911029e-7,0.00002716017,0.00006371621,0.7048361,0.00400893,0.00006994147,0.0001093853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984114,0.0002603917,0.001011913,0.00004036242,0.00007880264,0.0001242586,0.00001573236,0.00001582357,0.00004134011],"genre_scores_gemma":[0.9992049,0.0002859391,0.0001169119,0.00004410508,0.0000951446,0.0000137651,0.0001950695,0.000009989973,0.00003413294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2901659,"threshold_uncertainty_score":0.4107279,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01074438734564148,"score_gpt":0.2273704567716005,"score_spread":0.216626069425959,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}