{"id":"W2039021127","doi":"10.1038/nature13995","title":"Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism","year":2015,"lang":"en","type":"article","venue":"Nature","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":569,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Victoria; Agriculture and Agri-Food Canada","funders":"Biological and Environmental Research; National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; Office of Science; National Institutes of Health; Agriculture and Agri-Food Canada; Medical School, University of Michigan; Wellcome Trust; Canadian Institutes of Health Research; Mizutani Foundation for Glycoscience; U.S. Department of Energy","keywords":"Bacteroides thetaiotaomicron; Mannan; Yeast; Biology; Saccharomyces cerevisiae; Biochemistry; Glycan; Bacteria; Periplasmic space; Microbiology; Bacteroides; Microbiome; Polysaccharide; Gene; Genetics; Glycoprotein; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001191661,0.0001395339,0.0001358393,0.000006389448,0.0001413981,0.00007509268,0.0002922758,0.0006857375,0.0001252573],"category_scores_gemma":[0.00002303011,0.00005213557,0.00006928423,0.0001802399,0.00002921957,0.00008330571,0.00009724629,0.0007426371,0.0000276727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003011517,"about_ca_system_score_gemma":0.000008477432,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009846828,"about_ca_topic_score_gemma":0.0005934573,"domain_scores_codex":[0.999109,0.00003330403,0.0001199108,0.000255957,0.000210516,0.0002713399],"domain_scores_gemma":[0.9996538,0.00000904198,0.00005321425,0.00007147177,0.00008470473,0.0001277447],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002980619,0.0002679665,0.001131342,0.00001267798,0.00006097817,0.00003502522,0.000639618,6.150359e-7,0.8958253,0.04731461,0.0452181,0.009463903],"study_design_scores_gemma":[0.00135394,0.001932462,0.1084477,0.0001200426,0.00008087133,0.00007256863,0.002313821,0.00007489134,0.07107189,0.1514245,0.6617448,0.001362541],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9863393,0.0002802375,9.213755e-7,0.003850153,0.0003399512,0.000161315,0.000137036,0.0001146007,0.008776485],"genre_scores_gemma":[0.9963043,0.00000970005,0.0001488019,0.001911589,0.000298321,0.000004762127,0.00009629566,0.000001448473,0.001224813],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8247535,"threshold_uncertainty_score":0.5289036,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03008190179016798,"score_gpt":0.2522892332025795,"score_spread":0.2222073314124115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}