{"id":"W2039101308","doi":"10.1002/pmic.200900142","title":"Proteome reference map for the plant growth‐promoting bacterium <i>Pseudomonas putida</i> UW4","year":2009,"lang":"en","type":"article","venue":"PROTEOMICS","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; Swiss Institute of Bioinformatics","keywords":"Pseudomonas putida; Rhizosphere; Proteome; Bacteria; Pseudomonas; Plant growth; Biology; Pseudomonadaceae; Pseudomonadales; Microbiology; Botany; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003387336,0.001153839,0.0006977005,0.003895474,0.001044881,0.0006169807,0.0008637205,0.0005209749,0.005689774],"category_scores_gemma":[0.0009702122,0.0003536433,0.0006600042,0.005051682,0.0001738565,0.0005726721,0.0005441461,0.0008123255,0.003774282],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006998082,"about_ca_system_score_gemma":0.001265797,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004598026,"about_ca_topic_score_gemma":0.004237344,"domain_scores_codex":[0.9997931,0.00002582671,0.00002425973,0.00005359698,0.0000740104,0.00002909441],"domain_scores_gemma":[0.9996198,0.00004534036,0.00008950779,0.00004921442,0.0001440157,0.00005203833],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008826654,0.0001266804,0.001470955,0.0009350893,0.00006370661,0.0007956468,0.0001442228,0.0008989099,0.9571572,0.0009624703,0.009998666,0.02656377],"study_design_scores_gemma":[0.0002620431,0.0009221475,0.07942406,0.0003622683,0.0005664315,0.004962033,0.00046273,0.009076634,0.5300238,0.002166101,0.3715615,0.0002102084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.4687538,0.005540419,0.1328451,0.001323403,0.0004257607,0.0006473766,0.3614969,0.006934482,0.02203286],"genre_scores_gemma":[0.1291036,0.004438986,0.1492707,0.0001501461,0.00007932301,0.0006017598,0.7043957,0.0009843739,0.01097543],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005689774,"threshold_uncertainty_score":0.01903415,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03189779786181343,"score_gpt":0.223625172519429,"score_spread":0.1917273746576156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}