{"id":"W2039122614","doi":"10.3168/jds.2013-7657","title":"Association of coagulase-negative staphylococcal species, mammary quarter milk somatic cell count, and persistence of intramammary infection in dairy cattle","year":2014,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":105,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island; Université de Montréal","funders":"Public Health Agency; Dairy Farmers of Ontario; Dairy Farmers of Nova Scotia; Public Health Agency of Canada; Dairy Farmers of Canada; Agriculture and Agri-Food Canada; Novalait; Université de Montréal; American Association of Bovine Practitioners; Innovation PEI; University of Missouri; Natural Sciences and Engineering Research Council of Canada; Alberta Milk; U.S. Department of Agriculture","keywords":"Mastitis; Somatic cell count; Biology; Herd; Coagulase; Ice calving; Veterinary medicine; Lactation; Persistence (discontinuity); Staphylococcus; Mammary gland; Raw milk; Dairy cattle; Animal science; Microbiology; Staphylococcus aureus; Medicine; Food science; Pregnancy; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002338402,0.0001000177,0.0002912857,0.0000823736,0.0001070667,0.000042446,0.0003179916,0.00007630628,0.00004741387],"category_scores_gemma":[0.0006045033,0.00004992371,0.00007640997,0.0006001784,0.0003378845,0.0006742153,0.00007478138,0.0001945742,0.000001125464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001049209,"about_ca_system_score_gemma":0.00007695057,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000195906,"about_ca_topic_score_gemma":0.0006127154,"domain_scores_codex":[0.998256,0.0002069707,0.0005739509,0.0001698561,0.0005912919,0.0002019508],"domain_scores_gemma":[0.9981519,0.0005998989,0.0007896968,0.0000664686,0.0002994473,0.00009259357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001088006,0.0004363558,0.5074025,0.000189913,0.00002086433,0.000004551037,0.00281918,0.0001516626,0.476193,0.0005515111,0.001963952,0.01015764],"study_design_scores_gemma":[0.0004198654,0.0007759724,0.9752963,0.0001491856,0.00001619857,0.00001405344,0.0009468931,0.0005172548,0.01969148,0.001327744,0.0007264348,0.0001185991],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979292,0.00007991301,0.0001621483,0.0005251437,0.0002365127,0.00009136956,0.00001822289,0.000004207055,0.0009533389],"genre_scores_gemma":[0.9990695,0.0001429486,0.000535692,0.00006263652,0.00008577455,9.88109e-7,0.000001660384,5.561701e-7,0.0001002741],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4678937,"threshold_uncertainty_score":0.203583,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0166665834085366,"score_gpt":0.2180162201702028,"score_spread":0.2013496367616662,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}