{"id":"W2039533663","doi":"10.5731/pdajpst.2014.01013","title":"Preliminary Evaluation of Next-Generation Sequencing Performance Relative to qPCR and In Vitro Cell Culture Tests for Human Cytomegalovirus","year":2014,"lang":"en","type":"article","venue":"PDA Journal of Pharmaceutical Science and Technology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur; U.S. Food and Drug Administration; Sanofi","keywords":"Human cytomegalovirus; Virology; Cell culture; Polymerase chain reaction; Cytopathic effect; Biology; In vitro; Cytomegalovirus; Population; Real-time polymerase chain reaction; Human cell; In vitro toxicology; Microbiology; Virus; Computational biology; Medicine; Herpesviridae; Gene; Viral disease; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006070328,0.0009589521,0.0007159598,0.0005369733,0.0004885421,0.001050658,0.000639185,0.001474867,0.001883991],"category_scores_gemma":[0.006675913,0.0005813988,0.0007232177,0.0004206101,0.0005858051,0.000580223,0.0004693184,0.0008392296,0.0007920522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005947877,"about_ca_system_score_gemma":0.0005541764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00209441,"about_ca_topic_score_gemma":0.002668138,"domain_scores_codex":[0.9956225,0.001971794,0.0002854532,0.0006478144,0.001201479,0.0002710029],"domain_scores_gemma":[0.9948117,0.002960545,0.0003096605,0.0003028798,0.001498773,0.0001165196],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002727835,0.00009946041,0.002272862,0.0002007009,0.00002624388,0.0000371604,0.0001918613,0.001859537,0.9886748,0.0001234582,0.0001055196,0.006135567],"study_design_scores_gemma":[0.000005535711,0.0009712053,0.002796794,0.00001847059,0.00003760666,0.00007601704,0.00007074008,0.008175366,0.9865806,0.00006789163,0.001171745,0.00002801382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7778125,0.003898972,0.2101237,0.000409196,0.0003669918,0.0007128883,0.001798085,0.0007749555,0.004102565],"genre_scores_gemma":[0.7325965,0.002877331,0.250908,0.0005018338,0.000102512,0.001042528,0.002608996,0.0001472756,0.009214973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006070328,"threshold_uncertainty_score":0.03210336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1514714281417184,"score_gpt":0.4186867944098858,"score_spread":0.2672153662681673,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}