{"id":"W2040218462","doi":"10.1593/neo.04301","title":"Stability and Heterogeneity of Expression Profiles in Lung Cancer Specimens Harvested Following Surgical Resection","year":2004,"lang":"en","type":"article","venue":"Neoplasia","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; Toronto General Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Gene expression; Gene expression profiling; RNA extraction; Lung cancer; Real-time polymerase chain reaction; Biology; Reverse transcription polymerase chain reaction; Microarray; Gene; Complementary DNA; Pathology; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004711286,0.0001712298,0.0003377517,0.0006738594,0.000306093,0.0005362097,0.0002188852,0.0002691949,0.0005666475],"category_scores_gemma":[0.001184381,0.0001583832,0.0001819798,0.00055876,0.0003376601,0.0002705599,0.0002402705,0.0004134893,0.000392781],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002651484,"about_ca_system_score_gemma":0.0002347581,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008130574,"about_ca_topic_score_gemma":0.001015006,"domain_scores_codex":[0.9996172,0.00006054495,0.0000410368,0.0001099374,0.0001048927,0.00006644155],"domain_scores_gemma":[0.9992629,0.0002323309,0.0001666171,0.00008797831,0.0001929094,0.00005729151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003317667,0.00001576878,0.01209505,0.00003056883,0.00001677253,0.00008043867,0.0001147259,0.00007967763,0.9843268,0.00002893713,0.00003596424,0.002843587],"study_design_scores_gemma":[0.00001837061,0.0008980191,0.5679027,0.00001758108,0.00008145728,0.0007696743,0.0006814786,0.001215882,0.4256984,0.0001584018,0.002526651,0.0000314526],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956694,0.001231638,0.002074813,0.00004844684,0.00001443011,0.00002603926,0.0004649339,0.00002905654,0.0004411659],"genre_scores_gemma":[0.992869,0.0008910137,0.002496441,0.00006112991,0.00002301945,0.000122345,0.002463093,0.0000243724,0.001049707],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008130574,"threshold_uncertainty_score":0.002491593,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01617463792416111,"score_gpt":0.2964558176069373,"score_spread":0.2802811796827762,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}