{"id":"W2040274681","doi":"10.1139/g09-060","title":"Genome variation in the symbiotic nitrogen-fixing bacterium<i>Sinorhizobium meliloti</i>","year":2009,"lang":"en","type":"article","venue":"Genome","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Genome Canada; Ontario Innovation Trust; American Heart Association","keywords":"ORFS; Biology; Sinorhizobium meliloti; Replicon; Genome; Genetics; Genome size; Chromosome; Pulsed-field gel electrophoresis; Bacterial genome size; Biovar; Gene; Open reading frame; Symbiosis; Bacteria; Genotype; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001490804,0.0001580031,0.0001520214,0.0005557177,0.0001410109,0.0002101178,0.0001091973,0.0002012498,0.0003907266],"category_scores_gemma":[0.0003962742,0.0001045302,0.0001706725,0.0003925145,0.0001577564,0.000102434,0.0001674249,0.0001679193,0.00008394207],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003018403,"about_ca_system_score_gemma":0.0001501135,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002318404,"about_ca_topic_score_gemma":0.004289444,"domain_scores_codex":[0.9998176,0.00003339223,0.00001372161,0.00007172613,0.00003596344,0.00002770698],"domain_scores_gemma":[0.9996741,0.0000977435,0.0001284236,0.00002321444,0.00003827107,0.00003823466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001930156,0.00001476252,0.02910635,0.00004350224,0.00003252346,0.0000569221,0.0000964155,0.0001036518,0.9677423,0.00002882719,0.00002478385,0.002556935],"study_design_scores_gemma":[0.00000688102,0.0001579212,0.9493126,0.000004245783,0.000042932,0.0004873271,0.0001170687,0.0005533756,0.04866747,0.00004579014,0.0005946867,0.000009769257],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991552,0.0001399348,0.0002846642,0.00001119333,0.000001190985,0.000002085413,0.0002790298,0.000007740692,0.0001190453],"genre_scores_gemma":[0.9983112,0.00007920196,0.0006595296,0.00001782817,0.000001891293,0.000007506908,0.0007724575,0.0000050674,0.0001452616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002318404,"threshold_uncertainty_score":0.004609764,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01202227795354791,"score_gpt":0.197953571940251,"score_spread":0.1859312939867031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}