{"id":"W2041628570","doi":"10.1007/s11306-014-0746-7","title":"Standardizing the experimental conditions for using urine in NMR-based metabolomic studies with a particular focus on diagnostic studies: a review","year":2014,"lang":"en","type":"review","venue":"Metabolomics","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":232,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"King Abdullah University of Science and Technology; European Commission","keywords":"Metabolomics; Urine; Computer science; Computational biology; Medicine; Bioinformatics; Biology; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001580875,0.0009823898,0.004034016,0.0002200488,0.0003739096,0.00004454458,0.0004788828,0.0002173325,0.000007950315],"category_scores_gemma":[0.002546663,0.0005844312,0.0008901953,0.0004568872,0.0004244214,0.000007907748,0.0002613647,0.0003531269,0.000005300977],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001864198,"about_ca_system_score_gemma":0.0003369659,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004955838,"about_ca_topic_score_gemma":0.00003614137,"domain_scores_codex":[0.9961104,0.0006165875,0.001182386,0.001067957,0.0003179976,0.0007046288],"domain_scores_gemma":[0.9966267,0.00114846,0.0008117911,0.001034532,0.0002834256,0.00009502868],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003264336,0.006519494,0.0001938256,0.3556567,0.1253369,0.0003721198,0.001384396,0.006389391,0.005578999,0.07007428,0.03852619,0.3867033],"study_design_scores_gemma":[0.001554582,0.0006960102,0.000002490962,0.01067907,0.006106339,0.00002927973,0.0003178119,0.00004492699,0.001771225,0.0001314288,0.9777912,0.0008756552],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001669698,0.9928816,0.000757974,0.0002253587,0.0003631414,0.003654412,0.0004061427,0.00002010318,0.00002158548],"genre_scores_gemma":[0.001235184,0.9918691,0.002188793,0.0007191616,0.000378545,0.003221472,0.0002112499,0.0001399566,0.00003654724],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.939265,"threshold_uncertainty_score":0.9996607,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07974802748350497,"score_gpt":0.3975882679600842,"score_spread":0.3178402404765792,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}