{"id":"W2041724627","doi":"10.1111/j.1462-2920.2009.02049.x","title":"Identification and characterization of new LuxR/LuxI‐type quorum sensing systems from metagenomic libraries","year":2009,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Quorum sensing; Biology; Metagenomics; Cosmid; Chromobacterium violaceum; Gene; Genetics; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005014725,0.0001299305,0.0001735601,0.0000273896,0.00005199431,0.00002710812,0.00006043423,0.0001672005,0.00001701465],"category_scores_gemma":[0.000005326366,0.0001305453,0.00003277901,0.00002449089,0.00009466268,0.00001087291,0.00005795911,0.00004291122,0.00001146844],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001107487,"about_ca_system_score_gemma":0.00001442298,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003309564,"about_ca_topic_score_gemma":0.000002221462,"domain_scores_codex":[0.9992382,0.00006050917,0.000247972,0.0002894569,0.00002018666,0.0001437013],"domain_scores_gemma":[0.9996005,0.00000518453,0.0001625896,0.0001849187,0.000004200023,0.00004262599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007363666,0.00001759175,0.0005529279,0.000002611302,0.0000316149,6.309948e-7,0.00006051088,0.000001717706,0.9964306,0.00001756269,0.00008668274,0.002723949],"study_design_scores_gemma":[0.0002415961,0.0001553587,0.0334576,0.000008131276,0.00002516712,0.00002766027,0.00004675387,0.00001379967,0.9567675,0.00001223696,0.009112068,0.0001321349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981164,0.0009159766,0.0002233234,0.0001288103,0.0003496792,0.0001317108,0.0001138569,0.000007555561,0.00001274019],"genre_scores_gemma":[0.9966413,0.0002872167,0.0003995614,0.0001432696,0.0001894617,2.206455e-7,0.001959945,0.00001197068,0.0003670368],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03966307,"threshold_uncertainty_score":0.5323482,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005408997137780641,"score_gpt":0.1785783542604387,"score_spread":0.173169357122658,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}