{"id":"W2041914119","doi":"10.1371/journal.pgen.1003114","title":"Histone Deacetylase HDA6 Is Functionally Associated with AS1 in Repression of KNOX Genes in Arabidopsis","year":2012,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":115,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Key Research and Development Program of China; National Taiwan University; National Science Council; National Natural Science Foundation of China","keywords":"Biology; Chromatin immunoprecipitation; Repressor; Histone deacetylase; Histone; Chromatin; Mutant; Acetylation; Transcription (linguistics); Arabidopsis; Histone methyltransferase; Regulation of gene expression; Molecular biology; Cell biology; Gene expression; Gene; Genetics; Promoter","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002493917,0.00009190247,0.000162185,0.00003041786,0.0000311568,0.000005073381,0.0001443855,0.0001348121,0.0001341665],"category_scores_gemma":[0.0001110635,0.00003783174,0.00002872542,0.0003430516,0.00006574886,0.00002962759,0.00006936494,0.0001240341,0.00001256715],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004361473,"about_ca_system_score_gemma":0.0000150051,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005840822,"about_ca_topic_score_gemma":0.000941626,"domain_scores_codex":[0.9989545,0.000150261,0.000183809,0.0001854655,0.000233886,0.0002920982],"domain_scores_gemma":[0.9995863,0.000145369,0.00007528959,0.00006134711,0.00006366248,0.00006796969],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003981233,0.0002774727,0.4420308,0.000002853484,0.00001183537,0.000003684854,0.00004774309,0.00001507688,0.5559271,0.000002193317,0.00009968167,0.001541696],"study_design_scores_gemma":[0.0001969007,0.0001909236,0.7747704,0.00004494998,0.000008820054,0.000003676185,0.00003900903,0.0002313281,0.2240678,0.00002190945,0.0003189648,0.0001053738],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977553,0.001492574,6.284596e-7,0.0002685178,0.00002979169,0.0001414111,0.00004189173,0.00001001728,0.0002598885],"genre_scores_gemma":[0.9993317,0.0001544342,0.00007973611,0.00007966746,0.00003710321,0.00001443211,0.00007859405,0.000001180305,0.0002231834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3327395,"threshold_uncertainty_score":0.1542734,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03816223063581339,"score_gpt":0.2548432392698538,"score_spread":0.2166810086340404,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}