{"id":"W2042443730","doi":"10.1210/me.2010-0517","title":"Consensus PP1 Binding Motifs Regulate Transcriptional Corepression and Alternative RNA Splicing Activities of the Steroid Receptor Coregulators, p54nrb and PSF","year":2011,"lang":"en","type":"article","venue":"Molecular Endocrinology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"RNA splicing; Biology; Corepressor; RNA-binding protein; Minigene; RNA polymerase II; Cell biology; Splicing factor; Alternative splicing; Molecular biology; Exon; Transcription factor; RNA; Genetics; Gene; Promoter; Repressor; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001053004,0.0001793392,0.0002126702,0.00008143343,0.000128621,0.00001280281,0.0001798418,0.0001054849,0.00001744681],"category_scores_gemma":[0.00005795163,0.0001418489,0.00007510663,0.00006366302,0.0005601301,0.000006079274,0.0002417612,0.0001617364,7.752344e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001352545,"about_ca_system_score_gemma":0.0000403587,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001684367,"about_ca_topic_score_gemma":0.00001889958,"domain_scores_codex":[0.9986871,0.0001803593,0.0002209966,0.0003952991,0.0001576094,0.0003586558],"domain_scores_gemma":[0.9993905,0.0000237905,0.0001254459,0.0003163924,0.00005741148,0.00008644832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002073236,0.0000270601,0.009445595,0.00002697666,0.0001020178,0.00001580272,0.0001902178,0.00001094626,0.9856632,0.001708387,0.00004125362,0.002561235],"study_design_scores_gemma":[0.0007707931,0.0002423901,0.02012361,0.00004480153,0.00002161695,0.000147848,0.0001822933,0.0001318831,0.9776234,0.0003723945,0.0001969476,0.0001420018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976065,0.001040093,0.0004724055,0.0001162616,0.0001363807,0.000228812,0.00002944736,0.000009340371,0.0003607657],"genre_scores_gemma":[0.9985066,0.0002432457,0.0006824304,0.00006938576,0.000032664,0.00001402895,0.00001384038,0.00002283999,0.0004149723],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01067801,"threshold_uncertainty_score":0.5784428,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01932978529499191,"score_gpt":0.2427479049370248,"score_spread":0.2234181196420329,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}