{"id":"W2042770554","doi":"10.1371/journal.pone.0123813","title":"Rhizobium leguminosarum bv. viciae 3841 Adapts to 2,4-Dichlorophenoxyacetic Acid with “Auxin-Like” Morphological Changes, Cell Envelope Remodeling and Upregulation of Central Metabolic Pathways","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; University of Regina","funders":"","keywords":"Rhizobium leguminosarum; Metabolomics; Biology; Metabolic pathway; Rhizobium; Nitrogen fixation; Cell biology; Biochemistry; Metabolism; Symbiosis; Bacteria; Rhizobiaceae; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009726508,0.0004967528,0.0002889181,0.0002062753,0.0001119641,0.0002850588,0.0001738557,0.0003310782,0.0003139012],"category_scores_gemma":[0.00009557281,0.0001651234,0.0002850917,0.0002064538,0.0001446116,0.0001698862,0.0002209076,0.000320323,0.0001488471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002482535,"about_ca_system_score_gemma":0.0001839448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001786622,"about_ca_topic_score_gemma":0.001901486,"domain_scores_codex":[0.9998266,0.00002275991,0.00001104077,0.00004821289,0.00005163892,0.00003976223],"domain_scores_gemma":[0.9999087,0.000008877214,0.00003770706,0.00001039383,0.0000152965,0.00001908837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001612302,0.000004291589,0.0001418609,0.000007558619,0.000001279834,0.00001345102,0.00000316254,0.00001078148,0.9996376,0.00000313315,0.000002473548,0.0001581844],"study_design_scores_gemma":[0.000006837561,0.0004536193,0.03610719,0.000006038559,0.00001529061,0.0002679426,0.00009539193,0.0006427226,0.9613022,0.00003825017,0.001055787,0.000008726362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962502,0.0007897366,0.001646058,0.00007572344,0.000009643254,0.00002237217,0.0005553723,0.00006090616,0.0005899741],"genre_scores_gemma":[0.9953433,0.0004388354,0.001837112,0.0000701655,0.000003684057,0.00002917668,0.001089071,0.00001409523,0.001174725],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001786622,"threshold_uncertainty_score":0.003552496,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05947009907828101,"score_gpt":0.1908459021276433,"score_spread":0.1313758030493622,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}