{"id":"W2042847778","doi":"10.1016/j.peptides.2007.04.001","title":"Widespread and ample peptide overlapping between HCV and Homo sapiens proteomes","year":2007,"lang":"en","type":"article","venue":"Peptides","topic":"Hepatitis C virus research","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Proteome; Human proteome project; Biology; Homo sapiens; Peptide sequence; Hepatitis C virus; Computational biology; Homology (biology); Peptide; Genetics; Sequence homology; Virus; Virology; Amino acid; Proteomics; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008217543,0.000178522,0.0003590103,0.000211543,0.0001638784,0.00007028498,0.00007277668,0.0001011655,0.0001100217],"category_scores_gemma":[0.0008122584,0.0001600842,0.00004334302,0.0001928225,0.0002775233,0.0001583622,0.0001421319,0.0002936937,0.00007077317],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000068148,"about_ca_system_score_gemma":0.00006528715,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007288953,"about_ca_topic_score_gemma":0.0002572261,"domain_scores_codex":[0.9983516,0.0000383835,0.0002916779,0.0003651487,0.0003974354,0.0005558007],"domain_scores_gemma":[0.9987122,0.0004727261,0.00005565154,0.000267615,0.0001011988,0.0003905642],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004098572,0.000024368,0.878036,0.0001900086,0.00006138294,0.00008733159,0.0007899937,1.231323e-7,0.01537617,0.000125167,0.000847958,0.1044206],"study_design_scores_gemma":[0.0009680147,0.0002978045,0.9408321,0.0002630737,0.00004849648,0.00002764212,0.0003088352,0.00003383176,0.008556161,0.0004553119,0.0479921,0.0002166384],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9859858,0.0005537079,0.0004706028,0.0004990301,0.000028415,0.0006603047,0.00002456158,0.00009503553,0.01168251],"genre_scores_gemma":[0.9933656,0.0002532226,0.004442601,0.0001690462,0.000303813,0.00002348615,0.00001704424,0.00003622411,0.001388992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1042039,"threshold_uncertainty_score":0.6528043,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03551086951954387,"score_gpt":0.3331384147164763,"score_spread":0.2976275451969324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}