{"id":"W2042896900","doi":"10.1038/modpathol.3800527","title":"Cell reservoirs in lymph nodes infected with HIV-1 subtype E differ from subtype B: identification by combined in situ polymerase chain reaction and immunohistochemistry","year":2005,"lang":"en","type":"article","venue":"Modern Pathology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Centers for Disease Control and Prevention; National Institutes of Health; National Center for Genetic Engineering and Biotechnology","keywords":"Lymph; Germinal center; Biology; Histiocyte; Lymph node; Pathology; Immunohistochemistry; Follicular dendritic cells; Immunophenotyping; Langerhans cell; Reverse transcriptase; Dendritic cell; Virology; Polymerase chain reaction; B cell; Immunology; T cell; Flow cytometry; Medicine; Antigen-presenting cell; Antigen; Antibody; Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002922609,0.0002289585,0.0002215013,0.0004927499,0.0003190287,0.0005076211,0.0002403608,0.0003892038,0.001160881],"category_scores_gemma":[0.0002342303,0.0003106964,0.0001694374,0.0002413131,0.0002448852,0.0005715532,0.0002170317,0.0003731388,0.0003488037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001200834,"about_ca_system_score_gemma":0.0001253486,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005103097,"about_ca_topic_score_gemma":0.0007185863,"domain_scores_codex":[0.9998158,0.000030137,0.00001854711,0.00004512009,0.00002675978,0.0000636078],"domain_scores_gemma":[0.9998099,0.00008100853,0.00002462738,0.00002862433,0.00003591987,0.00001987532],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004819951,0.00003770046,0.007486418,0.000060792,0.00001117373,0.0001857569,0.0001537827,0.00003776329,0.9879996,0.0001670444,0.00002767399,0.003350257],"study_design_scores_gemma":[0.0001264948,0.001086588,0.193391,0.00005011377,0.000169974,0.003409568,0.001968655,0.002932635,0.7904528,0.0006807882,0.005706931,0.00002450103],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939948,0.001130445,0.002780368,0.00002409453,0.00001764606,0.00004689538,0.0001891689,0.00003132095,0.001785279],"genre_scores_gemma":[0.9914016,0.0008487483,0.005381153,0.00003970572,0.00002234924,0.00008625841,0.0003218194,0.00001986967,0.001878371],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001160881,"threshold_uncertainty_score":0.003883541,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006462962093162041,"score_gpt":0.2251266298320643,"score_spread":0.2186636677389022,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}