{"id":"W2043331768","doi":"10.1111/j.1478-3231.2009.01974.x","title":"Metagenomics and autoimmune liver disease: searching for the unknown","year":2009,"lang":"en","type":"letter","venue":"Liver International","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Metagenomics; Biology; Microbiome; Disease; Autoimmune hepatitis; Molecular mimicry; Autoimmune disease; Infectious disease (medical specialty); Genome; Autoimmunity; Computational biology; Immunology; Evolutionary biology; Genetics; Gene; Hepatitis; Medicine; Immune system; Antibody; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001716099,0.0002495753,0.000267184,0.0001194338,0.0002108275,0.0001395217,0.0004066953,0.0001655938,0.0005326771],"category_scores_gemma":[0.000110931,0.0001770484,0.0003101328,0.00004250841,0.0001389462,0.0001217006,0.0001953161,0.0009290447,0.00003600703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001302582,"about_ca_system_score_gemma":0.0001680301,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001568406,"about_ca_topic_score_gemma":0.00000200638,"domain_scores_codex":[0.9986825,0.00005621405,0.000234113,0.0003253526,0.0004421876,0.000259631],"domain_scores_gemma":[0.9987594,0.0004240518,0.0001199889,0.0004008757,0.0002017451,0.00009393486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004189619,0.0001202486,0.0007406265,0.0003079146,0.00152338,0.0004032693,0.0002488918,0.000008171388,0.0000307322,0.001163479,0.9674723,0.02756206],"study_design_scores_gemma":[0.0007028776,0.00006913389,0.1146283,0.0001358636,0.0008373125,0.00003983112,0.00001083837,0.00571983,0.000004948536,0.000283913,0.8773896,0.0001776469],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.006514938,0.02706927,0.001737724,0.9562796,0.001856127,0.00213332,0.001319194,0.0001262154,0.0029636],"genre_scores_gemma":[0.02942374,0.008503844,0.001792303,0.8709537,0.01103432,0.0001673028,0.004308998,0.00012735,0.07368841],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.1138877,"threshold_uncertainty_score":0.7219824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0370935754374299,"score_gpt":0.2881142278872983,"score_spread":0.2510206524498684,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}