{"id":"W2043466583","doi":"10.3382/ps.2009-00148","title":"Novel avian leukosis virus-related endogenous proviruses from layer chickens: Characterization and development of locus-specific assays","year":2009,"lang":"en","type":"article","venue":"Poultry Science","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Nova Scotia Department of Agriculture","funders":"Canada Research Chairs","keywords":"Endogenous retrovirus; Biology; Genome; Long terminal repeat; Endogeny; Genetics; Locus (genetics); Gene; Virus; Vertebrate; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004050259,0.0004097621,0.0001978723,0.000614428,0.0001471531,0.0003599957,0.000247413,0.0004079313,0.0005997834],"category_scores_gemma":[0.0004806927,0.0002342729,0.0002068258,0.0001504144,0.0003123537,0.0001934436,0.0002407801,0.0005658714,0.0002890054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001991833,"about_ca_system_score_gemma":0.0001744841,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00058493,"about_ca_topic_score_gemma":0.001348198,"domain_scores_codex":[0.999553,0.00008113391,0.0000611392,0.0001206249,0.0001065684,0.00007756543],"domain_scores_gemma":[0.9995844,0.0001940341,0.00007800257,0.00004690263,0.00004164435,0.00005502054],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003632336,0.00002185859,0.0009036242,0.0000208904,0.000002767831,0.00002250082,0.00002197392,0.00002281628,0.9981865,0.00002684077,0.000002771608,0.0007311305],"study_design_scores_gemma":[0.0000160412,0.0005618666,0.02160116,0.000009504643,0.00003486715,0.0006628179,0.00008368518,0.00075574,0.9752621,0.00005770746,0.0009456977,0.000008814382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9753811,0.000750455,0.02187108,0.00002494448,0.00001614532,0.0002454714,0.0004980955,0.00006204854,0.001150702],"genre_scores_gemma":[0.942729,0.0008949908,0.05107071,0.00004447028,0.00001460345,0.0002235807,0.002697926,0.00003514097,0.002289567],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.000614428,"threshold_uncertainty_score":0.002142012,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05327094861781911,"score_gpt":0.2702796782780281,"score_spread":0.217008729660209,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}