{"id":"W2043503013","doi":"10.1186/1471-2164-10-441","title":"Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Calgary","funders":"University of North Carolina at Chapel Hill; Fondation pour la Recherche Médicale; Cardiff University; Cystic Fibrosis Foundation Therapeutics","keywords":"Burkholderia cenocepacia; Quorum sensing; Biology; Gene; Caulobacter crescentus; Genetics; DNA microarray; Microarray analysis techniques; Regulation of gene expression; Microarray; Gene expression profiling; Virulence; Mutant; Gene regulatory network; Gene cluster; Gene expression; Cell cycle","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002750391,0.000441352,0.0002921113,0.0003980478,0.0001558157,0.0003863384,0.0001735906,0.0002640903,0.0006124244],"category_scores_gemma":[0.0003315355,0.0001426446,0.000193434,0.0002311053,0.0002703954,0.0002166073,0.0003155596,0.000432723,0.0002814603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003824139,"about_ca_system_score_gemma":0.0002016643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008161071,"about_ca_topic_score_gemma":0.0008681121,"domain_scores_codex":[0.9995546,0.00006235534,0.00003635119,0.000103443,0.0001507429,0.00009259154],"domain_scores_gemma":[0.9995266,0.000109213,0.0001631839,0.00004146137,0.00009653912,0.00006295012],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004291603,0.0000111416,0.0003610093,0.00001724549,0.000001604777,0.00001580852,0.000007655788,0.00001434679,0.9991829,0.00001417305,0.000008780267,0.0003224915],"study_design_scores_gemma":[0.00001868207,0.0003625334,0.0457195,0.00001012786,0.00002897291,0.00042661,0.0001212622,0.00115652,0.9510477,0.00007813917,0.001016663,0.00001315298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957876,0.0009740094,0.001880515,0.0001045551,0.0000167094,0.0000219672,0.0004846882,0.0000785599,0.0006513174],"genre_scores_gemma":[0.9956488,0.0002707285,0.002611102,0.00006889366,0.000009038821,0.00003542032,0.0007541041,0.00001547352,0.0005864998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008161071,"threshold_uncertainty_score":0.002774596,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01159187157175295,"score_gpt":0.2185281713066048,"score_spread":0.2069362997348519,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}