{"id":"W2043811573","doi":"10.1016/j.ijfoodmicro.2006.09.009","title":"Phage types, virulence genes and PFGE profiles of Shiga toxin-producing Escherichia coli O157:H7 isolated from raw beef, soft cheese and vegetables in Lima (Peru)","year":2006,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"STX2; Virulence; Escherichia coli; Biology; Microbiology; Shiga toxin; Shiga-like toxin; Raw milk; Agar; Polymerase chain reaction; Enterotoxin; Immunomagnetic separation; Tryptic soy broth; Pulsed-field gel electrophoresis; Raw meat; Food science; Bacteria; Gene; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002917993,0.0001543793,0.0002857298,0.0001180635,0.00003426366,0.00002382876,0.0002748867,0.000136901,0.00001145712],"category_scores_gemma":[0.0001861926,0.0001358984,0.00005496744,0.000072765,0.0002391655,0.0000179172,0.0002532356,0.0001776497,6.798911e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002537495,"about_ca_system_score_gemma":0.0001045776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001765467,"about_ca_topic_score_gemma":0.0003878136,"domain_scores_codex":[0.9988856,0.0001193783,0.0004406821,0.0002634915,0.00009117767,0.0001996479],"domain_scores_gemma":[0.9991626,0.00005712786,0.0002890122,0.0001076619,0.0003428548,0.00004073847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003869107,0.0001093611,0.02088948,0.00001897351,0.000274565,0.0000165334,0.00008587999,0.00005236824,0.9771106,0.00005404396,0.000134122,0.0008672304],"study_design_scores_gemma":[0.001586807,0.0008583342,0.05288251,0.0001137819,0.00002902464,0.0001189903,0.00009158748,0.0000846875,0.9413306,0.0003230463,0.002391543,0.0001890656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9763877,0.02273594,0.0001500566,0.0002933956,0.0001875552,0.000109615,0.00007721197,0.000002953693,0.00005557056],"genre_scores_gemma":[0.9958366,0.002109416,0.001578881,0.00009389725,0.0002637401,0.000004828757,0.00004761228,0.0000133757,0.00005165474],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03577991,"threshold_uncertainty_score":0.5541775,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007915439549029336,"score_gpt":0.2471276840663288,"score_spread":0.2392122445172994,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}