{"id":"W2043896507","doi":"10.1016/j.virusres.2005.06.007","title":"Phylogeny and antigenic relationships of three cervid herpesviruses","year":2005,"lang":"en","type":"article","venue":"Virus Research","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biology; Epitope; Phylogenetic tree; Virology; Phylogenetics; Gene; Virus; Antigen; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007871134,0.0001001151,0.0002021586,0.0003488546,0.0002789248,0.00001899287,0.00006796675,0.0001143001,0.0005314818],"category_scores_gemma":[0.0002385407,0.00008241244,0.00005930031,0.000551,0.0002317976,0.0000948959,0.00007610374,0.0004268728,0.0005762083],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007933646,"about_ca_system_score_gemma":0.0001279629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006808144,"about_ca_topic_score_gemma":0.001779595,"domain_scores_codex":[0.9986445,0.0001471577,0.0002342798,0.0002442603,0.0004212568,0.0003085005],"domain_scores_gemma":[0.9989632,0.0002527848,0.00003402455,0.0003762957,0.0002101138,0.0001635325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0002058978,0.0007980515,0.4278099,0.00008895085,0.0002533786,0.00002603116,0.0003046301,0.000007523289,0.02006653,0.001732632,0.001024932,0.5476816],"study_design_scores_gemma":[0.001744155,0.0004413604,0.6491072,0.0000945668,0.00006803944,0.00005533317,0.00009937828,0.0002499624,0.04477289,0.001160913,0.3020656,0.0001406135],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.977696,0.001818623,0.00004787135,0.0004660906,0.00002614988,0.0003797598,0.00001327116,0.00003555705,0.01951665],"genre_scores_gemma":[0.9965122,0.001435209,0.001058879,0.00003520661,0.0001251684,0.0000328627,0.00000574205,0.00002129715,0.0007734016],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.547541,"threshold_uncertainty_score":0.7406185,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2209228923262208,"score_gpt":0.4140592663650938,"score_spread":0.193136374038873,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}