{"id":"W2044097905","doi":"10.1186/1471-2164-8-72","title":"Transcriptional profiling of Actinobacillus pleuropneumoniae under iron-restricted conditions","year":2007,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Institute for Biological Sciences; Cegep de Saint Hyacinthe; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Actinobacillus pleuropneumoniae; Gene; Transcriptome; Genetics; Gene expression profiling; ORFS; DNA microarray; Microarray; Proteome; Microbiology; Gene expression; Open reading frame; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001766077,0.0001118546,0.0001512688,0.0001777487,0.000194569,0.00001018439,0.0001182548,0.0001495284,0.0006516888],"category_scores_gemma":[0.00003876686,0.0001127532,0.0001198101,0.0001870044,0.0001936964,0.00004883147,0.00003466493,0.0002010197,0.0002426993],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008382645,"about_ca_system_score_gemma":0.0002428497,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008758659,"about_ca_topic_score_gemma":0.0001095581,"domain_scores_codex":[0.9990714,0.00007328736,0.0003057609,0.000193504,0.0000339148,0.0003221161],"domain_scores_gemma":[0.9994286,0.0001498653,0.00007860447,0.0001862614,0.0001145875,0.00004211824],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001201449,0.0001900011,0.002550098,0.00002748547,0.00004911925,0.000001562733,0.00005478449,0.0003267447,0.9885293,0.007795634,0.0002029099,0.0001521639],"study_design_scores_gemma":[0.002023006,0.0001531924,0.09436011,0.0000157682,0.00008337501,0.000109927,0.0008094316,0.00002334728,0.8925683,0.0005631336,0.008992027,0.0002984187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892604,0.0004934348,0.007888186,0.0000319675,0.0003195328,0.0002430773,0.0003024983,0.00004408496,0.001416766],"genre_scores_gemma":[0.9983661,0.00004655696,0.0004638704,0.00003648971,0.00003734712,0.00000691003,0.0003553276,0.00001509732,0.0006723545],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09596109,"threshold_uncertainty_score":0.7135535,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03881866030940408,"score_gpt":0.2930734906535803,"score_spread":0.2542548303441763,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}