{"id":"W2044174375","doi":"10.1002/prot.20946","title":"Modeling and functional analysis of AEBP1, a transcriptional repressor","year":2006,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Institute for Marine Biosciences; Dalhousie University","funders":"","keywords":"Repressor; Chemistry; DNA-binding domain; Electrophoretic mobility shift assay; GATAD2B; Transcription (linguistics); Molecular biology; Psychological repression; Transcription factor; Lac repressor; Transcriptional regulation; YY1; Biochemistry; Gene expression; Gene; Biology; Promoter","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001341102,0.000682103,0.0004171106,0.0002332036,0.0003618269,0.0002554089,0.000632749,0.0004228871,0.002031621],"category_scores_gemma":[0.0002421876,0.0002106126,0.0004111794,0.0002331881,0.0001399619,0.0002322748,0.0001073063,0.0002861106,0.0005727537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005123558,"about_ca_system_score_gemma":0.0005110416,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004572453,"about_ca_topic_score_gemma":0.002051438,"domain_scores_codex":[0.9999368,0.000010131,0.000002307472,0.00001237739,0.00002526348,0.00001310362],"domain_scores_gemma":[0.9999338,0.00001828049,0.00001066336,0.000006505988,0.00002086651,0.000009913146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0004549172,0.000226257,0.003284851,0.0002529518,0.0000570495,0.0004759676,0.00009769923,0.4177669,0.5602291,0.0053506,0.001079563,0.01072413],"study_design_scores_gemma":[0.00003201436,0.00008952024,0.001398516,0.000003689041,0.00001506105,0.00008002853,0.00003177282,0.9488592,0.046765,0.0005455659,0.002171366,0.000008312144],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9505629,0.0003321166,0.04275057,0.0001617606,0.00001838923,0.00003192728,0.001252678,0.0005599456,0.004329724],"genre_scores_gemma":[0.9757937,0.0003068915,0.01912971,0.000015403,0.000005257847,0.00005186247,0.002951736,0.0001443022,0.001601102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004572453,"threshold_uncertainty_score":0.009091675,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0116128164328509,"score_gpt":0.2153705885585441,"score_spread":0.2037577721256932,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}