{"id":"W2044302133","doi":"10.1111/j.1529-8817.2008.00554.x","title":"PHYLOGENETIC RELATIONSHIPS AMONG LINEAGES OF THE CERAMIACEAE (CERAMIALES, RHODOPHYTA) BASED ON NUCLEAR SMALL SUBUNIT rDNA SEQUENCE DATA<sup>1</sup>","year":2008,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Plant and Fungal Species Descriptions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Ceramiales; Biology; Rhodomelaceae; Sensu; Monophyly; Subfamily; Phylogenetic tree; Molecular phylogenetics; Tribe; Botany; Paraphyly; Genus; Taxonomy (biology); Clade; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003511572,0.0001522251,0.000252401,0.00009863224,0.0002339184,0.00001139943,0.0007521338,0.0002319783,0.00009875323],"category_scores_gemma":[0.0003927754,0.0001163236,0.000153133,0.0001656369,0.0003990995,0.00001042818,0.0001473462,0.0004654062,0.00000614397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003413474,"about_ca_system_score_gemma":0.0001918086,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001622461,"about_ca_topic_score_gemma":0.0000528861,"domain_scores_codex":[0.9986119,0.0003460415,0.0004398006,0.0002110827,0.000180208,0.0002109303],"domain_scores_gemma":[0.9986148,0.0001206828,0.0004256139,0.000567425,0.0001848471,0.00008664598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007503667,0.0006337658,0.2617169,0.00005060854,0.0002854397,0.000119155,0.0002769482,0.04485963,0.6687694,0.0003115615,0.02114395,0.001082336],"study_design_scores_gemma":[0.002478602,0.00240402,0.8150258,0.0001268731,0.0002469899,0.000852206,0.0002487664,0.01595566,0.02123043,0.0001227942,0.1407813,0.0005265951],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972249,0.0003228954,0.0002569562,0.0003491769,0.000231377,0.0001299094,0.0001468745,0.000004941989,0.001333027],"genre_scores_gemma":[0.9972898,0.0003390821,0.001262826,0.0002944354,0.0004594009,0.000001454728,0.00005858392,0.00002069579,0.0002736637],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.647539,"threshold_uncertainty_score":0.4743539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1001442829807167,"score_gpt":0.2481512091021453,"score_spread":0.1480069261214287,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}