{"id":"W2044705396","doi":"10.1371/journal.pone.0022011","title":"Subdominant/Cryptic CD8 T Cell Epitopes Contribute to Resistance against Experimental Infection with a Human Protozoan Parasite","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo; Conselho Nacional de Desenvolvimento Científico e Tecnológico; University of Ottawa; Emory University","keywords":"Epitope; Immunodominance; Biology; Subdominant; Virology; Immune system; Antigen; CD8; Cytotoxic T cell; T cell; Intracellular parasite; Immunology; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001845696,0.0003466895,0.0003217965,0.0001748774,0.0000627999,0.0001602982,0.0001073896,0.0003441858,0.000845936],"category_scores_gemma":[0.0002488372,0.0001700071,0.0001663887,0.00006006563,0.0003167707,0.0001202419,0.0001354646,0.0007157858,0.0001726137],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001221376,"about_ca_system_score_gemma":0.0001096034,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001387447,"about_ca_topic_score_gemma":0.0001215192,"domain_scores_codex":[0.9998655,0.00002925316,0.00001244615,0.00003660348,0.00001850359,0.0000376644],"domain_scores_gemma":[0.9998242,0.00004727052,0.00004152635,0.00002841067,0.000009776448,0.00004884878],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007538808,0.0001117533,0.001758565,0.00004638085,0.000008489972,0.00009386986,0.00002679305,0.00006975304,0.994419,0.00004608306,0.00002060518,0.002644692],"study_design_scores_gemma":[0.0003166585,0.008503733,0.07517055,0.00002230338,0.0001128213,0.004129304,0.000105633,0.002214481,0.9065344,0.0003831053,0.002489254,0.00001777592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980812,0.0008800847,0.0004873733,0.00004907433,0.000008413871,0.00002650181,0.0000339254,0.00002977446,0.0004037147],"genre_scores_gemma":[0.9989786,0.0002426771,0.000348288,0.00003000936,0.00001020801,0.00001511535,0.00004450757,0.000003926313,0.0003266306],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000845936,"threshold_uncertainty_score":0.002829969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06906466357766726,"score_gpt":0.2923995940584902,"score_spread":0.2233349304808229,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}