{"id":"W2044952902","doi":"10.1073/pnas.1312637110","title":"KpsC and KpsS are retaining 3-deoxy- <scp>d</scp> - <i>manno</i> -oct-2-ulosonic acid (Kdo) transferases involved in synthesis of bacterial capsules","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Escherichia coli; Campylobacter jejuni; Phosphatidylglycerol; Glycosyltransferase; Biochemistry; Transferase; Complementation; Heptose; Neisseria meningitidis; Chemistry; Linker; Biofilm; Glycan; Moiety; Biology; Bacteria; Stereochemistry; Glycoprotein; Enzyme; Gene; Phospholipid","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000761497,0.0001873709,0.0003898811,0.0001320743,0.0001363149,0.00005044082,0.0007542624,0.0002102777,0.0001057316],"category_scores_gemma":[0.002409338,0.0001438482,0.0001172085,0.0004960842,0.00102715,0.0005633894,0.0001183414,0.0002224308,8.522723e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004085496,"about_ca_system_score_gemma":0.00004938649,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002974217,"about_ca_topic_score_gemma":8.487522e-7,"domain_scores_codex":[0.9979784,0.000008926486,0.0005801851,0.0003638296,0.0008153504,0.0002533053],"domain_scores_gemma":[0.9984451,0.0007090838,0.0005305166,0.00002147157,0.0002306605,0.00006319533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001034136,0.00005352052,0.0143432,0.0004485991,0.00002468906,2.278576e-8,0.0004797792,0.000005036383,0.983647,0.0005679254,0.0001634162,0.0002563975],"study_design_scores_gemma":[0.0001923027,0.000009875625,0.01309358,0.0005280029,0.00002735942,0.0000045306,0.002699596,0.0001978858,0.9783742,0.004740881,0.00005263629,0.00007917019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914628,0.0002703324,6.544393e-8,0.0006544673,0.00001087188,0.00009605601,0.00007643914,0.00001465811,0.007414256],"genre_scores_gemma":[0.9993836,0.0001226532,0.0002229052,0.00003952572,0.00008648144,0.00004049092,5.734723e-7,0.000008986485,0.0000947672],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007920763,"threshold_uncertainty_score":0.5865961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02944166636022252,"score_gpt":0.2419100284493454,"score_spread":0.2124683620891228,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}