{"id":"W2045586090","doi":"10.1186/1471-2164-10-295","title":"Gene expression profiling via LongSAGE in a non-model plant species: a case study in seeds of Brassica napus","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Biology; Brassica; Gene; Gene expression profiling; Proteases; Gene expression; Proteome; Proteomics; Genetics; Expressed sequence tag; DNA microarray; Botany; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002178335,0.000349928,0.0002224543,0.0003068349,0.0002769787,0.0002521228,0.0001913995,0.0003981836,0.000351169],"category_scores_gemma":[0.0002371073,0.00008317063,0.0002850618,0.0002841544,0.0002856206,0.0001337831,0.0001769845,0.0002369983,0.0002489471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000296806,"about_ca_system_score_gemma":0.0001459851,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001504628,"about_ca_topic_score_gemma":0.003097667,"domain_scores_codex":[0.9998571,0.00002074726,0.000007287566,0.00005789339,0.00003875714,0.00001821847],"domain_scores_gemma":[0.9997973,0.00007999627,0.00003519304,0.00002576871,0.00003711855,0.00002470135],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003361595,0.000008025032,0.00074491,0.00004119183,0.000003299355,0.0001870206,0.00007785345,0.00007322008,0.9977477,0.00001969247,0.00001145816,0.001051876],"study_design_scores_gemma":[0.00001334114,0.000725575,0.07758511,0.00001778866,0.00007953033,0.004107637,0.0006433724,0.003264899,0.9071277,0.0002153441,0.006195796,0.00002405362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870073,0.001070614,0.01050114,0.00007502476,0.00001020811,0.00004427238,0.0005733166,0.0001157419,0.0006022988],"genre_scores_gemma":[0.9759148,0.001032919,0.01919071,0.00005353163,0.00001194974,0.00004678365,0.002061488,0.00006088229,0.001627037],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001504628,"threshold_uncertainty_score":0.002991676,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04274202181179908,"score_gpt":0.2654012441314955,"score_spread":0.2226592223196964,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}