{"id":"W2045675480","doi":"10.1016/j.resmic.2011.04.014","title":"Modulation of Pseudomonas aeruginosa surface-associated group behaviors by individual amino acids through c-di-GMP signaling","year":2011,"lang":"en","type":"article","venue":"Research in Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":151,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Division of Molecular and Cellular Biosciences; Cystic Fibrosis Canada; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health; Chinese Academy of Agricultural Sciences","keywords":"Biofilm; Biology; Swarming motility; Amino acid; Valine; Arginine; Pseudomonas aeruginosa; Microbiology; Tyrosine; Biochemistry; Phenylalanine; Leucine; Motility; Ornithine; Bacteria; Quorum sensing; Cell biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009113864,0.0002643429,0.0001330929,0.00008907719,0.0001286442,0.0002164384,0.0001422037,0.0002708962,0.0005444096],"category_scores_gemma":[0.0001450103,0.00008187098,0.0001046092,0.00008961505,0.0001822041,0.0001896311,0.0002329308,0.0004763515,0.0001682188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003308138,"about_ca_system_score_gemma":0.0002184776,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009137557,"about_ca_topic_score_gemma":0.001535173,"domain_scores_codex":[0.999917,0.00001630555,0.000004483689,0.00001235889,0.00002385129,0.00002592263],"domain_scores_gemma":[0.9999003,0.00002210261,0.00002165981,0.00001098163,0.00001213472,0.00003271982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007178068,0.000006383273,0.00004027149,0.000004826682,5.091775e-7,0.000009741548,0.000003290745,0.00001864428,0.9994678,0.000021008,0.000006792264,0.0003490535],"study_design_scores_gemma":[0.00001741511,0.0001188805,0.004392896,0.00000249816,0.000003983211,0.00004124141,0.00002156201,0.001164575,0.9937784,0.00005995922,0.0003946714,0.000003906645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977167,0.0003154005,0.0008341923,0.0001003985,0.00001147512,0.00001180925,0.00007276714,0.0000167659,0.0009205975],"genre_scores_gemma":[0.9978608,0.0002112644,0.001034956,0.00004577942,0.000004665784,0.00001618509,0.000057308,0.000006133548,0.000762969],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009137557,"threshold_uncertainty_score":0.002400279,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06036232464027898,"score_gpt":0.3127532861025105,"score_spread":0.2523909614622316,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}