{"id":"W2045723786","doi":"10.1038/ismej.2011.93","title":"Phylodynamics and movement of Phycodnaviruses among aquatic environments","year":2011,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Instituto Nacional de Pesquisas da Amazônia; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Ecology; Phylogeography; Bacterioplankton; Viral phylodynamics; Population; Phylogenetic tree; Phytoplankton; Evolutionary biology; Nutrient; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001390155,0.00006732818,0.0000724576,0.0000126974,0.000121222,0.00001590116,0.0001402882,0.00001915453,0.001791281],"category_scores_gemma":[0.000004396163,0.00004356425,0.00003836594,0.00003101412,0.0002010306,0.0001677895,0.00009932993,0.0001340878,0.00005558909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004136208,"about_ca_system_score_gemma":0.000002170285,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000453383,"about_ca_topic_score_gemma":0.0001017184,"domain_scores_codex":[0.9995219,0.00003299869,0.0001647411,0.00006753515,0.00009892027,0.0001138849],"domain_scores_gemma":[0.9996854,0.00001361139,0.0001419874,0.0001086905,8.143429e-7,0.00004947176],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002722705,0.0002498213,0.05584675,0.00000310732,0.00007425813,0.000006649562,0.005125925,0.00006599261,0.9205688,0.00004148245,0.0005258546,0.01746419],"study_design_scores_gemma":[0.0001938282,0.00008912924,0.978278,0.00001789239,0.00004150655,0.0000447891,0.0003428247,0.0003330226,0.01796763,0.001216411,0.001391404,0.00008359551],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964231,0.00002246884,0.0006166588,0.00005786075,0.0001043359,0.0000589937,0.000002204573,0.000002375336,0.002712019],"genre_scores_gemma":[0.9984484,0.0001355182,0.0005016077,0.0001612684,0.00002158412,0.000001355765,2.509861e-7,0.000006551079,0.0007234879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9224312,"threshold_uncertainty_score":0.9991212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01527448420791401,"score_gpt":0.2025907936198421,"score_spread":0.1873163094119281,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}