{"id":"W2045919491","doi":"10.1038/sj.gene.6364400","title":"Distinctive gene expression signatures in rheumatoid arthritis synovial tissue fibroblast cells: correlates with disease activity","year":2007,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Rheumatoid Arthritis Research and Therapies","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Arthritis Society; Genome Canada","keywords":"Biology; Rheumatoid arthritis; Gene expression profiling; Immunology; Gene signature; Gene expression; Erythrocyte sedimentation rate; Arthritis; Cancer research; Gene; Internal medicine; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002977782,0.0002110346,0.0003170628,0.0001322758,0.000274406,0.0000485707,0.00008308976,0.00009154784,0.0001287157],"category_scores_gemma":[0.00006214669,0.000162125,0.0000410201,0.0001717135,0.0003000235,0.0001857784,0.0001066316,0.0004044209,0.000007303464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000356501,"about_ca_system_score_gemma":0.00008778129,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005435674,"about_ca_topic_score_gemma":0.0003985058,"domain_scores_codex":[0.9987317,0.0001092774,0.0002003815,0.0002706423,0.0002689574,0.0004190449],"domain_scores_gemma":[0.9990684,0.0001719584,0.00006678791,0.0002834201,0.00008135807,0.0003281113],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.008602011,0.0006244999,0.03661513,0.000100557,0.00005894651,0.0004111334,0.0009343293,0.00004643844,0.7985997,0.00005870104,0.0001399671,0.1538086],"study_design_scores_gemma":[0.004759224,0.001321263,0.3480229,0.001717312,0.000003924422,0.00009046417,0.0008215207,0.00023681,0.6400481,0.0001810415,0.002413456,0.0003839349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9737733,0.02429709,0.001074529,0.00008283363,0.00006115381,0.0004040003,0.00004177031,0.00004435936,0.0002209875],"genre_scores_gemma":[0.9699518,0.02939941,0.0004249414,0.0000221129,0.00003933698,0.00001970858,0.00003449534,0.0000240645,0.00008413532],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3114077,"threshold_uncertainty_score":0.6611266,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007566655329279317,"score_gpt":0.2436785842348025,"score_spread":0.2361119289055232,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}