{"id":"W2045975407","doi":"10.1016/j.meegid.2007.10.006","title":"Nucleotide sequence and phylogenetic analysis of a new potexvirus: Malva Mosaic Virus","year":2007,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval; Agriculture and Agri-Food Canada; Wilfrid Laurier University","funders":"","keywords":"Biology; Potexvirus; GenBank; Virology; Genetics; Phylogenetic tree; Turnip yellow mosaic virus; ORFS; Virus; Pseudoknot; Plant virus; Novel virus; Sequence analysis; Nucleic acid sequence; Genome; RNA; Gene; Open reading frame; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002623099,0.0003994171,0.000387605,0.0009584675,0.0004963095,0.000452522,0.0003032864,0.0005405319,0.0007472062],"category_scores_gemma":[0.0004693193,0.000208857,0.0004722852,0.0005295401,0.0002735031,0.0003009536,0.0002966566,0.0009211378,0.000457356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003925904,"about_ca_system_score_gemma":0.0002639797,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009404558,"about_ca_topic_score_gemma":0.0009020228,"domain_scores_codex":[0.9998794,0.0000171205,0.0000129224,0.00003745273,0.000026284,0.00002680447],"domain_scores_gemma":[0.9994439,0.0001597201,0.00009279379,0.00004770224,0.00008678169,0.0001691046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005085234,0.00009475739,0.005598439,0.00008928226,0.00002897518,0.0008545897,0.000257412,0.0002018803,0.9869406,0.0001662039,0.00009876485,0.005160613],"study_design_scores_gemma":[0.0001665891,0.002568865,0.6703354,0.0001599092,0.0006346706,0.01540273,0.001450657,0.005442508,0.2658488,0.0009487363,0.03693134,0.000109754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952952,0.0007645444,0.00200431,0.00009480937,0.00005308108,0.00005439845,0.0007540423,0.00002399578,0.0009556099],"genre_scores_gemma":[0.9866326,0.0005673904,0.004829248,0.000216402,0.00005244154,0.00004439867,0.006113539,0.00002286967,0.001521095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009584675,"threshold_uncertainty_score":0.002848446,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03654175171962405,"score_gpt":0.2763309995293692,"score_spread":0.2397892478097451,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}