{"id":"W2046040835","doi":"10.1186/1471-2164-10-309","title":"Genomic evidence for non-random endemic populations of decaying exons from mammalian genes","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Biology; Exon; Genetics; Neofunctionalization; Gene duplication; Gene; Subfunctionalization; Pseudogene; Genome; Alternative splicing; Population; Gene family; Copy-number variation; Stop codon; Tandem exon duplication","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000306366,0.0001297514,0.0002111857,0.00151073,0.0002606388,0.0004207336,0.0002600074,0.0003161884,0.001510143],"category_scores_gemma":[0.001113574,0.0001363911,0.0001999591,0.001044908,0.0005504154,0.0002261625,0.0004861602,0.0003039672,0.0002336599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001232504,"about_ca_system_score_gemma":0.0001160368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002790672,"about_ca_topic_score_gemma":0.0005707984,"domain_scores_codex":[0.9996556,0.00003577366,0.00003700973,0.0001695374,0.00006363863,0.00003835893],"domain_scores_gemma":[0.997613,0.0008952881,0.0008351571,0.0002113018,0.0002319632,0.0002132619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008173836,0.00005331662,0.4230746,0.0002673609,0.0002475342,0.0007815135,0.0007743255,0.0003519543,0.557017,0.000954456,0.0001284076,0.01553204],"study_design_scores_gemma":[0.00001667257,0.0002592851,0.9744599,0.00002081312,0.0001146792,0.0033366,0.0002824486,0.0004255275,0.01885881,0.0004692772,0.00174423,0.00001179444],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979699,0.0002881127,0.0009649515,0.00001433328,0.000001288063,0.000005240324,0.0002736904,0.00001463693,0.0004677749],"genre_scores_gemma":[0.9976026,0.0001670163,0.0009224787,0.00003477997,0.000007250424,0.0000136231,0.001074782,0.000007071386,0.0001704118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00151073,"threshold_uncertainty_score":0.005051911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06915958220630015,"score_gpt":0.3020333423896918,"score_spread":0.2328737601833916,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}