{"id":"W2046427628","doi":"10.1006/tpbi.2002.1601","title":"Gene Mapping via the Ancestral Recombination Graph","year":2002,"lang":"en","type":"article","venue":"Theoretical Population Biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Coalescent theory; Linkage disequilibrium; Trait; Graph; Population; Biology; Recombination; Evolutionary biology; Genetics; Computer science; Gene; Theoretical computer science; Haplotype; Allele; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002143917,0.0001093656,0.00009395933,0.00003743285,0.000129281,0.0000110583,0.0001567206,0.0001721142,0.0003012805],"category_scores_gemma":[0.00008420054,0.00007167865,0.00006998119,0.0001130383,0.0003488998,0.000002410969,0.00004902005,0.00008843665,0.00004181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001102651,"about_ca_system_score_gemma":0.000003650444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008666237,"about_ca_topic_score_gemma":0.000007546858,"domain_scores_codex":[0.9990927,0.000175923,0.000214122,0.0002422363,0.00006211802,0.0002129255],"domain_scores_gemma":[0.9995631,0.00002029466,0.00006612812,0.0002529306,0.00004687208,0.00005069658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.00006023742,0.0001537918,0.03277956,0.000009244868,0.0000677983,9.542008e-7,0.00010634,0.0006750474,0.1495994,0.7691718,0.001551798,0.04582409],"study_design_scores_gemma":[0.001344195,0.0007050905,0.155177,0.000009401345,0.00004214965,0.0001030264,0.00006600554,0.06612849,0.006762353,0.7580966,0.01087258,0.000693046],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8806763,0.0004264996,0.1109897,0.003147763,0.0004551635,0.0002502152,0.00001298602,0.00004270417,0.003998585],"genre_scores_gemma":[0.9975201,0.0001355503,0.001002263,0.0005682905,0.0001792864,0.00001209663,0.0003170461,0.0000108494,0.0002544519],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.142837,"threshold_uncertainty_score":0.329881,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01387722921544199,"score_gpt":0.251691468194063,"score_spread":0.237814238978621,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}