{"id":"W2046742475","doi":"10.1016/j.ijfoodmicro.2009.10.026","title":"Mycobacterium avium subsp. paratuberculosis in muscle, lymphatic and organ tissues from cows with advanced Johne's disease","year":2009,"lang":"en","type":"article","venue":"International Journal of Food Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada; Canadian Cattlemen's Association; University of Guelph","funders":"","keywords":"Paratuberculosis; Lymph; Lymphatic system; Biology; Mesenteric lymph nodes; Lymph node; Mycobacterium; Kidney; Staining; Agar; Pathology; Veterinary medicine; Food science; Spleen; Microbiology; Medicine; Bacteria; Tuberculosis; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002793726,0.0003057982,0.0003667376,0.0006666998,0.0007247822,0.0005440144,0.0002824003,0.0006520035,0.0007409224],"category_scores_gemma":[0.000706941,0.0004560769,0.0002058849,0.0003420175,0.0004472342,0.0002512831,0.000391868,0.0006007946,0.0003261098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002493414,"about_ca_system_score_gemma":0.0001824106,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002549547,"about_ca_topic_score_gemma":0.002054249,"domain_scores_codex":[0.9997575,0.0000330892,0.00002606822,0.00005521658,0.00005320802,0.0000750113],"domain_scores_gemma":[0.9996618,0.0001011862,0.00005705011,0.00002748873,0.00008097761,0.00007142263],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003968135,0.0003526775,0.1954514,0.0003725581,0.0001007091,0.0213778,0.002657081,0.0002702257,0.7659251,0.0001636551,0.0004800362,0.008880586],"study_design_scores_gemma":[0.0001140567,0.001658102,0.9141009,0.00006514766,0.0002061601,0.02991197,0.003697445,0.0008023324,0.04647507,0.0001421043,0.002804974,0.00002179968],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998757,0.0004259016,0.0001677309,0.00004814289,0.00001586041,0.000008787832,0.0001037515,0.000004233956,0.0004686806],"genre_scores_gemma":[0.9985858,0.0002762276,0.0002298242,0.00008180697,0.00002323971,0.00001115893,0.0002865055,0.000003631383,0.0005018277],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002549547,"threshold_uncertainty_score":0.005069375,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007879678074425736,"score_gpt":0.2651275229219925,"score_spread":0.2572478448475668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}